Sorex fumeus (smoky shrew): 130040114
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Entry
130040114 CDS
T10594
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130040114 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130040114 (NHLRC1)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130040114 (NHLRC1)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130040114 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_11
Beta-prop_EML_2
Baculo_IE-1
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
130040114
NCBI-ProteinID:
XP_055988106
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MEAASGEPGERPALWELVQEAESSLLECQVCFERFEPRTPRRPRSLPCGHVLCVSCVREL
THPRRLALECPFCRLPCAASGARDCLPLLHLLELLASELRPRPGARAAPRVPGAPRAFGG
WGTLVHPTGLALCPRSARVAVVHDGEKRVRTCDLWGGHARQFGERGRAAEDVQYPLDVTV
TRDGHVVVTDAGDRAVKVFDARGRCKLVLGGRFALPWGVDACPDDDGDGGGAVVLVTDAE
VGSLHRLELDPAAGTLRGSVQLRGQLRGPRAVAVCRLSGAVAVLERPLASRAGGAAGAAG
AVVKVFSAHMQLLAQVDSFGLSLLCPTPIAVSAVAFDNQGNVVVTDTAGPAVLCLGKPQE
MPVVKVVVTHGLVRPVALAFTKQNSLLVLDSQTHSVNVYRLVDGE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgtcgggcgagccgggcgagcggccggcgctctgggagctggtgcaggag
gccgagagcagcctgctcgagtgccaggtgtgcttcgagcgcttcgagccgcgcacgccg
cgccggccgcgcagcctgccgtgcggccacgtgctgtgcgtgtcgtgcgtgcgcgagctg
acgcacccgcggcgcctggccctcgagtgtcccttctgccgcctgccgtgcgcggcgtcg
ggcgcgcgggactgcctgcccctgctgcacctgctggagctgctggcgtccgagctgcgg
ccgcggcccggcgcgcgcgccgccccccgcgtccccggcgccccccgcgccttcgggggc
tgggggaccctggtgcaccccacggggctggcgctgtgcccgcggagcgcgcgcgtggcg
gtggtgcacgacggcgagaagcgcgtgcgcacctgcgacctgtggggcggccacgcgcgg
cagttcggcgagaggggtcgggccgccgaggacgtgcagtacccgctggacgtcacggtg
acccgcgacggccacgtcgtcgtcacggacgccggcgatcgcgccgtcaaggtcttcgac
gcccggggccgctgcaagctggtgctgggcggccgcttcgccctcccctggggggtggac
gcctgccccgacgacgacggcgacggtggcggcgccgtggtgctggtgaccgacgcggag
gtggggagcctgcaccgcctggagctggacccggcggccgggactctgcggggcagcgtc
cagctgcggggacagctgcgcgggccgcgcgccgtggccgtgtgccggctcagcggggcc
gtggcggtgctcgagcgccccctggcgtcccgggcgggtggcgcggcgggcgcggcaggc
gcggtggtcaaggtgttcagcgcccacatgcagctgctggcccaggtggacagcttcggg
ctgagcctcctctgccccaccccgatcgccgtctccgccgtggccttcgacaaccagggc
aacgtggtggtcaccgatacggccggcccggccgtcctgtgcctcgggaagccgcaggag
atgcccgtggtgaaggtggtcgtcacccacgggctggtccgtcccgtggccctggccttc
accaagcagaactcgcttctggtgctcgacagtcagacccattccgtcaacgtctacagg
ctcgtcgacggggagtga
DBGET
integrated database retrieval system
