Sorex fumeus (smoky shrew): 130040259
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Entry
130040259 CDS
T10594
Symbol
TRIM27
Name
(RefSeq) zinc finger protein RFP
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130040259 (TRIM27)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130040259 (TRIM27)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130040259 (TRIM27)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-Tbcl_FmdE
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
130040259
NCBI-ProteinID:
XP_055988259
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MASGSVAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMERE
KIVWEFEQLYHALKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSGLIAQLEEKQ
QQPTRELLQDIGDTLNRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREAQLYSVDVTLDPDTAYPSLILSENLRQVRYSYLQQDLPDNPERFNLFPCV
LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL
TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG
GKSAAPLIICPMSGIAGFSGHVGSHGHSMETSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggagcgtggccgagtgcctgcagcaggagaccacctgccccgtgtgcctg
cagtacttcgccgagcccatgatgctcgactgcggccacaacatctgttgcgcgtgcctg
gcccgctgctggggcgcggccgagaccaacgtgtcgtgcccgcagtgccgggagaccttc
ccgcagcgccacatgcggcccaaccggcacctggccaacgtgacccagctggtgaagcag
ctgcgcaccgagcggccgtcggggcccggcggcgagatgggcgtgtgcgagaagcaccgc
gagccgctcaagctgtactgcgaggaggaccagatgcccatctgcgtggtgtgcgaccgc
tcgcgcgagcaccgcggccacagcgtgctgccgctcgaggaggccgtggagggcttcaag
gagcaaattcagaatcagctggaccatctcaaaagagtgaaagacttaaagaagaggcgg
cgggctcagggcgagcaggcacgcgcagaactcttgagcctgacccagatggagcgggag
aagatcgtgtgggagttcgagcagctctaccacgcgctcaaggagcacgagtaccgcctc
ctggcgcgcctggaggagctggacctggccatctacaacagcatcaacggcgccatcacg
cagttctcctgcaacatctcccacctcagcggcctcatcgcccagctggaggagaagcag
cagcagccgacgcgggaactcctgcaggacatcggggacacactcaacagggctgaaagg
atcaggatcccggaaccttggatcacacctccagatctgcaggagaaaatccacattttt
gcccagaaatgcctgttcttgaccgagagtctgaagcaattcacagaaaaaatgcagtcg
gatatggagaaaatccaagaattgagagaggctcagttatactcagtggacgtgacgctg
gatcccgacacggcctaccccagcctcatcctgtccgagaacctgcggcaggtgcgctac
agttacctccagcaggacctgcccgacaaccccgagcgcttcaacctcttcccctgcgtg
ctgggctccccgtgcttcatcgccggccgccactactgggaggtggaggtgggcgacaag
gccaagtggacgatcggcgtgtgcgaagactccgtgtgcaggaagggcggcgtgacctcg
gccccccagaacggattctgggccgtgtccctgtggtacggcaaggagtactgggccctg
acctccccgatgacggccctgcccctgcggacccctctccagcgggtgggcatcttcttg
gactatgacgcgggagaggtctccttctacaacgtgaccgagcggtgtcacaccttcacg
ttctcgcacgccaccttctgcgggcccgtgcggccctacttcagcctgagctactcgggc
gggaagagcgcggcgccgctcatcatctgccccatgagcggcatcgccggcttctccggc
catgtgggcagtcacggccattccatggagacctccccgtga
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