Sorex fumeus (smoky shrew): 130040263
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Entry
130040263 CDS
T10594
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 2
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130040263 (KDM1B)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
130040263 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
Pyr_redox_2
Thi4
zf-CW
DAO
SWIRM
Pyr_redox_3
HI0933_like
Pyr_redox
FAD_binding_3
Lycopene_cycl
FAD_oxidored
FAD_binding_2
NAD_binding_9
GIDA
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_7
Attractin
zf-RING_2
YjeF_N
KARI_N
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
130040263
NCBI-ProteinID:
XP_055988265
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MATSRGRTKKKASFDNFADSLPLRSSGRQAKKKATEILDDNEDGGCEKKYRKCEKAGCTA
TCPVCFASASERCARNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYVTWKKIWTSN
GKSEPSPKAFMADQQLPYWVQCTNPECGKWRQLTKETQLTSQIARTYRCGWKPNSAIKPE
NTGNCCTQPEDLRVSEVSSHWWHSMLILPPLLKDSVAAPLLRAYYPDCVGMSPSCTSTQH
TAASPGKPDPAKAAPSALVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRD
PTMYLALRNLILALWYTNCKEALTPQKCTPHIIVRGLVRIRCVQEVERILYFMTRKGLIN
TGVLTVGPDQSLLPKDYHNKSVIIVGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWD
DLSFQGVTVGRGAQIVNGCVNNPIALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRM
DFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFMKESGIQFSELEEQVLQFHLSNL
EYACGSDLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIMAKLAEGLDIRLRSPVQSVDY
SGEEVRVTTTDGTGYAAQKVLVTIPLALLQKGAIQFHPPLSEKKMKAINSLGAGIIEKIA
LQFPYRFWDSKVQGADFFGHVPPTASKRGLFAVFYDMDPQKQHSVLMSVIAGEAVASLPS
LDDKQLQQQCMAALRELFKEQEVPDPTQFFVTRWSADPWIQMAYSFVKTGGSGEAYDIIA
EDIQGLVHFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcccgggggaggaccaagaaaaaagcatccttcgataactttgcagatagc
cttcctttgcggagctcggggaggcaggcgaagaaaaaggccacggagatcctcgatgac
aacgaggacggcgggtgcgagaagaagtaccggaagtgtgagaaggcgggctgcacggcc
acctgtcccgtgtgctttgccagtgcttccgagaggtgtgccaggaacggctacacatcc
cggtggtatcacctctcctgcggggagcatttctgcaatgagtgtttcgaccactactac
agaagccataaagatggatatgaaaaatatgttacgtggaaaaaaatctggacgagcaac
gggaaaagcgagccgagccccaaggcgttcatggcggaccagcagctcccatactgggtc
cagtgcacaaacccggagtgtgggaagtggaggcagctcaccaaggagacgcagctcacc
tcccagatcgcacggacctaccggtgcggctggaagccgaattctgccatcaagcccgag
aacactgggaactgttgcacccagccagaggacctgagggtgtcagaagtctctagccac
tggtggcactccatgctcatcctgccgcccctgctgaaggacagcgtggcagcacccctg
ctgcgtgcctactaccccgactgtgtgggcatgagcccgtcctgcacgagcacacagcac
acggccgccagccccgggaagccggaccccgccaaggctgctccctcagcattggttcca
ggcatgaaccgctacttccagcctttctaccagcccaacgagtgcggcaaagccctgtgc
gtgcggccggacgtgatggagctggacgagctgtatgagttcccggagtactcccgggac
cccaccatgtacctggccctacgcaacctcatcctggccctgtggtacaccaactgcaaa
gaagctctgaccccgcagaagtgcaccccccacatcatcgtccgcgggctggtacgcatc
cgatgcgtgcaggaagtagagcggattctctattttatgaccaggaaggggctcatcaac
accggggtgctcaccgtgggcccggaccagtccctgctgcctaaagattaccacaacaaa
tcagttatcatcgtcggggccggcccagcaggattagcagctgccaggcaactgcataac
tttgggataaaggtgacagtcctggaagccaaagaccgaattgggggccgagtgtgggat
gatctgtccttccaaggcgtcaccgtgggacgaggcgcacaaattgtcaacggctgcgtg
aacaaccccatcgcgctgatgtgtgaacaacttggcatcagcatgcataaattcggagag
agatgtgacttaattcaggaaggtggaagaattactgaccccactattgacaagcgcatg
gattttcattttaatgccctcttggatgttgtctctgagtggaggaaggataagactcag
ctgcaagatgtgcccttaggagagaagatcgaggagatctacaaggccttcatgaaggag
tcgggcatccagttcagcgagctggaggagcaggtgctgcagttccacctcagcaacctg
gagtacgcgtgtggcagtgacctgcaccaggtatctgcccgctcctgggaccacaatgag
ttcttcgctcagtttgccggggaccacactctcctcacccccggctactccgtcatcatg
gcaaagctggccgaaggcctggacattcgtctccggtctccagtgcagagtgtcgattat
tctggagaggaggtgcgcgtgaccaccacggatgggacggggtacgctgcccagaaggta
ttagtcaccataccgctggccttattgcagaagggagccatccagtttcacccgcctttg
tcagagaagaagatgaaggccatcaacagcttaggcgcaggcatcattgaaaagatcgcc
ttgcagtttccttaccgattctgggacagtaaagtccaaggcgcagacttctttggccac
gtgcctccgactgccagtaagcgcgggctctttgccgtcttctatgacatggacccccag
aagcagcacagcgtgctgatgtccgtgatcgccggggaggcagtggcgtccctgcccagc
ctggacgacaagcagctgcagcagcagtgcatggcggcgctccgcgagctcttcaaggag
caggaagtcccggaccccacgcagttcttcgtcactcggtggagcgccgacccctggatc
cagatggcctacagtttcgtgaagacaggcggcagcggtgaggcctatgacatcatcgcc
gaggacatccagggcctggtccacttcgctggggaggcaaccaacaggcacttcccacag
acggtgacaggggcgtatctgagtggtgttcgggaagccagcaagatcgcagcgttctaa
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