Sorex fumeus (smoky shrew): 130040360 Help Entry 130040360         CDS       T10594                                  Symbol ITGB1 Name (RefSeq) integrin beta-1 isoform X1   KO K05719   integrin beta 1 Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum03271   Virion - Rotavirus sfum04015   Rap1 signaling pathway sfum04145   Phagosome sfum04151   PI3K-Akt signaling pathway sfum04360   Axon guidance sfum04510   Focal adhesion sfum04512   ECM-receptor interaction sfum04514   Cell adhesion molecule (CAM) interaction sfum04517   IgSF CAM signaling sfum04518   Integrin signaling sfum04530   Tight junction sfum04611   Platelet activation sfum04670   Leukocyte transendothelial migration sfum04810   Regulation of actin cytoskeleton sfum04820   Cytoskeleton in muscle cells sfum05100   Bacterial invasion of epithelial cells sfum05133   Pertussis sfum05135   Yersinia infection sfum05140   Leishmaniasis sfum05145   Toxoplasmosis sfum05165   Human papillomavirus infection sfum05200   Pathways in cancer sfum05205   Proteoglycans in cancer sfum05222   Small cell lung cancer sfum05410   Hypertrophic cardiomyopathy sfum05412   Arrhythmogenic right ventricular cardiomyopathy sfum05414   Dilated cardiomyopathy Brite KEGG Orthology (KO) [BR:sfum00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03271 Virion - Rotavirus     130040360 (ITGB1)  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     130040360 (ITGB1)    04151 PI3K-Akt signaling pathway     130040360 (ITGB1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     130040360 (ITGB1)    04514 Cell adhesion molecule (CAM) interaction     130040360 (ITGB1)    04517 IgSF CAM signaling     130040360 (ITGB1)    04518 Integrin signaling     130040360 (ITGB1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     130040360 (ITGB1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     130040360 (ITGB1)    04530 Tight junction     130040360 (ITGB1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     130040360 (ITGB1)    04810 Regulation of actin cytoskeleton     130040360 (ITGB1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     130040360 (ITGB1)    04670 Leukocyte transendothelial migration     130040360 (ITGB1)   09158 Development and regeneration    04360 Axon guidance     130040360 (ITGB1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     130040360 (ITGB1)    05205 Proteoglycans in cancer     130040360 (ITGB1)   09162 Cancer: specific types    05222 Small cell lung cancer     130040360 (ITGB1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     130040360 (ITGB1)   09171 Infectious disease: bacterial    05135 Yersinia infection     130040360 (ITGB1)    05133 Pertussis     130040360 (ITGB1)    05100 Bacterial invasion of epithelial cells     130040360 (ITGB1)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     130040360 (ITGB1)    05140 Leishmaniasis     130040360 (ITGB1)   09166 Cardiovascular disease    05410 Hypertrophic cardiomyopathy     130040360 (ITGB1)    05412 Arrhythmogenic right ventricular cardiomyopathy     130040360 (ITGB1)    05414 Dilated cardiomyopathy     130040360 (ITGB1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sfum04131]     130040360 (ITGB1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sfum04147]     130040360 (ITGB1)    04515 Cell adhesion molecules [BR:sfum04515]     130040360 (ITGB1)    04090 CD molecules [BR:sfum04090]     130040360 (ITGB1) Membrane trafficking [BR:sfum04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     130040360 (ITGB1) Exosome [BR:sfum04147]  Exosomal proteins   Proteins found in most exosomes    130040360 (ITGB1) Cell adhesion molecules [BR:sfum04515]  Integrins   Integrin beta subunits    130040360 (ITGB1) CD molecules [BR:sfum04090]  Proteins   130040360 (ITGB1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E Motif Other DBs NCBI-GeneID:  130040360 NCBI-ProteinID:  XP_055988387 LinkDB All DBs Position Unknown AA seq 801 aa AA seqDB search MNLQLIIWIGLSSSICCVLGQTDENKCLKANAKSCGDCIQAGPNCGWCTNSTFLQEGMPT SARCDDLEALKKKGCHPDDIENPRGSKKIKKNKNVTNRSKGTAEKLLPEDITQIQPQQLV LQLRSGEPQTFKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTDKGEVFNELVGKQR ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ CHLENDVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL SANSSNVIQLIIDAYNSLSSEVILENSKLPEGVKISYKSYCKNGVNGTGENGRKCSNISI GDEVQFEINITSDKCPSKNPETIKIKPLGFTEEVEIILHFICNCECEKEGIPHSPKCHDG NGTFECGACRCDEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNSGECVCGQCVCRK RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTTSCM ATNGQICNGRGICECGACKCTDPKFQGPTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDT CAQECSHFNITKVENRDKLPQPGQFDPLSHCKEKDVDDCWFYFTYSVNGNNEAIVHVVET PECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN PIYKSPINNFKNPNYGRKARL NT seq 2406 nt NT seq  +upstreamnt  +downstreamnt atgaatttgcaactgatcatctggattggactgagcagttcaatttgctgtgtacttggc caaacagatgaaaataaatgtttaaaggcaaatgccaaatcatgcggtgattgtatacaa gcagggccaaattgtggatggtgtacaaattcaacatttttacaagaaggaatgcccact tctgcacgatgtgatgacttagaagccttaaaaaagaagggttgccacccagatgacata gaaaatcccagaggctccaaaaagataaagaaaaacaaaaatgtgactaaccgtagcaaa ggcacagcagagaagctcctccctgaagacatcactcagatacaaccacagcagctggtc ttgcagttacggtcaggggagcctcagacattcaaattaaaattcaagagagcagaagac tatcctattgatctctactacctgatggacctctcgtactctatgaaagatgatttggag aatgtgaaaagtctcgggacggatctgatgaatgaaatgaggaggattacttcagacttc cggattgggtttggatcatttgtagagaaaactgtgatgccttatattagtacaacacca gctaagctcaggaacccttgcacaagtgaacagaactgcaccagcccatttagctacaaa aatgtgcttagtcttactgataaaggagaagtatttaatgaacttgttggtaaacaacgc atatctggaaatttggattccccagaaggaggctttgatgcaattatgcaagttgcagtt tgcggatccttgattggctggcggaatgttacccggctgctagtattctctacagatgct ggctttcattttgctggagatggaaagcttgggggtattgttttgccaaatgatggtcag tgccacctcgaaaatgatgtgtacacaatgagtcattactatgattacccttctattgct caccttgtccaaaagcttagtgaaaataacatccagacaatttttgcagtcactgaggaa tttcagcctgtttacaaggaattgaaaaatttgatccctaaatcagcagtaggaacatta tctgcaaattctagcaatgtcattcagttgatcattgatgcatacaattctctttcctca gaagtcattctggaaaacagtaagttaccagaaggagtgaaaataagttacaagtcgtac tgtaaaaatggagtgaatgggactggggaaaatggaaggaaatgctccaatatttccatt ggagatgaggttcaatttgaaataaacataacttcagataaatgcccaagtaagaatcct gaaacaattaaaattaagcctctgggcttcactgaagaggtagagattattcttcacttc atctgtaattgtgaatgtgaaaaggaaggcatccctcatagtccaaagtgtcatgacgga aatggaactttcgaatgtggagcttgcaggtgcgacgagggacgtgttggtagacactgt gaatgtagcactgatgaagtgaacagtgaagatatggatgcttactgcaggaaagagaac agttcagaaatctgtagtaacagcggagagtgtgtctgcggacagtgtgtgtgtcggaag agggataatacgaatgaaatttattctggcaaattctgcgagtgtgataatttcaactgt gataggtccaatggcttaatatgtggagggaatggtgtttgcaagtgtcgggtgtgtgaa tgcaaccccaactacactggcagtgcgtgtgactgttctttggatactacttcatgcatg gccacaaatggacagatctgcaatggccgaggcatctgcgagtgtggtgcctgtaaatgt acagacccgaagtttcaaggaccaacatgtgagatgtgtcaaacctgccttggtgtctgt gctgagcataaggaatgtgtccagtgcagagccttcaataaaggagaaaagaaagacacg tgtgcacaagagtgctcacattttaacattaccaaggtggaaaatcgggacaaattacct cagcctggccagtttgacccgctctcccactgtaaggagaaggatgttgacgactgctgg ttctatttcacatactcagtgaatgggaacaacgaggccattgtccatgttgtggagact ccagagtgtcccactggaccagacatcatcccaattgtagcaggtgtggttgctggaatt gttcttattggccttgcgttgctgctgatatggaagcttttaatgataattcacgataga agggaatttgccaaatttgaaaaggaaaaaatgaatgccaaatgggacacgcaagaaaat ccgatttacaagagtcctattaataatttcaagaatccaaactatggacgtaaagctcgt ctctaa

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