Sorex fumeus (smoky shrew): 130040383 Help Entry 130040383         CDS       T10594                                  Symbol RXRB Name (RefSeq) retinoic acid receptor RXR-beta   KO K08525   retinoid X receptor beta Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum03320   PPAR signaling pathway sfum04659   Th17 cell differentiation sfum04919   Thyroid hormone signaling pathway sfum04920   Adipocytokine signaling pathway sfum04928   Parathyroid hormone synthesis, secretion and action sfum05200   Pathways in cancer sfum05202   Transcriptional misregulation in cancer sfum05207   Chemical carcinogenesis - receptor activation sfum05216   Thyroid cancer sfum05222   Small cell lung cancer sfum05223   Non-small cell lung cancer sfum05226   Gastric cancer sfum05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:sfum00001]  09150 Organismal Systems   09151 Immune system    04659 Th17 cell differentiation     130040383 (RXRB)   09152 Endocrine system    04920 Adipocytokine signaling pathway     130040383 (RXRB)    03320 PPAR signaling pathway     130040383 (RXRB)    04919 Thyroid hormone signaling pathway     130040383 (RXRB)    04928 Parathyroid hormone synthesis, secretion and action     130040383 (RXRB)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     130040383 (RXRB)    05202 Transcriptional misregulation in cancer     130040383 (RXRB)    05207 Chemical carcinogenesis - receptor activation     130040383 (RXRB)   09162 Cancer: specific types    05226 Gastric cancer     130040383 (RXRB)    05216 Thyroid cancer     130040383 (RXRB)    05222 Small cell lung cancer     130040383 (RXRB)    05223 Non-small cell lung cancer     130040383 (RXRB)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     130040383 (RXRB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:sfum03000]     130040383 (RXRB)   09183 Protein families: signaling and cellular processes    03310 Nuclear receptors [BR:sfum03310]     130040383 (RXRB) Transcription factors [BR:sfum03000]  Eukaryotic type   Zinc finger    Cys4 hepatocyte nuclear factor 4-like     130040383 (RXRB) Nuclear receptors [BR:sfum03310]  2. Hepatocyte nuclear factor 4 like   2B. Retinoid X receptor (RXR)    130040383 (RXRB) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Hormone_recep zf-C4 Nuc_recep-AF1 Motif Other DBs NCBI-GeneID:  130040383 NCBI-ProteinID:  XP_055988429 LinkDB All DBs Position Unknown AA seq 521 aa AA seqDB search MPRGSVGRWGCEKKCIVGSRPGGGGGGPGWIPRRRRRRRRRETHKARSRSRGRLDGTGWA TAGGTPEAQTVPPPTPFPREPLPLLLPGPPYPLLQRHPLEAQGPHPQCPPPPLGSPFPVI SSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPVGGAGPPEDVKPPVLGVRGLHCPPPPG GPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNR CQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSD QGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGW NELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMR MDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLR LPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA NT seq 1566 nt NT seq  +upstreamnt  +downstreamnt atgccgcggggcagtgtgggccggtgggggtgcgaaaagaaatgcattgtggggtcgcgt cccggtggcggcggcggcggccctggctggatcccgcggcggcggcggcggcggcggcgg cgggagacccacaaagcccggagccggagccgggggaggctggacgggacgggatgggcg acagcgggcgggactcccgaagcccagacagttcctcccccaacccccttccccagggag cccctcccgcttctcctcccgggccccccctacccccttctgcagcggcatcccttggag gctcaggggccccacccccaatgccccccccctcccctaggctcccccttccctgtcatc agctcttccatgggctcccctggcctgccccctccagcgccccctggattctccgggcct gtcagcagcccccagattaattcaacagtgtcgctccctgtgggtggggctggcccccct gaagatgtgaagccaccagtcctaggagtccggggcctgcactgtccaccgccccctggt ggccctggagctggcaaacgactgtgtgcaatctgtggggaccgaagttcaggcaaacac tatggggtttatagctgtgagggctgcaaagggttcttcaagcgaaccatccgtaaggac ctgacctactcgtgtcgagacaacaaggactgcacggtggacaagcgccagcggaaccgc tgtcagtactgccgctatcagaagtgcctggccacgggcatgaagcgggaggcggtacag gaggagcgtcagcgggggaaggacaaggacggggatggggagggggctgggggagccccc gaggagatgcctgtggacaggatcctggaggcagagctggctgtggagcagaagagtgac cagggcgttgagggtcccgggggaaccgggggtagcggcagcagcccaaacgaccccgtg actaacatctgtcaggccgctgacaagcagctgttcaccctggttgagtgggccaagagg atcccacacttttcctccttgcctctggatgaccaggtcatattgctacgggcaggctgg aacgagctgctcattgcctccttttcccaccgatccattgatgtccgggatggcatcctg ctggccacggggcttcatgtgcaccgcaactctgcccattcggccggcgtgggagccatc tttgaccggtccctctccagggtgctgacagagctagtgtccaaaatgcgtgacatgagg atggacaagacagagctgggctgcctgcgggcaatcattctgttcaatccagatgccaag ggcctctccaaccccagtgaagtcgaggtcctgcgggagaaagtgtatgcgtccctggag acctactgcaaacagaagtacccggagcagcagggacggtttgccaagctgctgctacgt cttcctgccctcaggtccatcggccttaagtgtttagagcacctgtttttcttcaagctt attggcgacacccccattgacactttcctcatggaaatgctggaggctccccaccagctg gcctga

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