Sorex fumeus (smoky shrew): 130040579
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Entry
130040579 CDS
T10594
Symbol
PAX6
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04550
Signaling pathways regulating pluripotency of stem cells
sfum04950
Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
130040579 (PAX6)
09160 Human Diseases
09167 Endocrine and metabolic disease
04950 Maturity onset diabetes of the young
130040579 (PAX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130040579 (PAX6)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130040579 (PAX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
130040579
NCBI-ProteinID:
XP_055988626
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQ
NVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRL
LSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGT
SVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALE
KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP
ISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTMANNLPMQPP
VPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGGCTWDSIGLIS
PGVSVPVQVPGSEPDMSQYWPRLQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagtcacagcggagtgaaccagctcggtggtgtctttgtcaacgggcggcca
ctgccggactccacccggcagaagatcgtagaactagctcacagcggggcccggccgtgc
gacatttcccgaattctgcagacccatgcagatgcaaaagtccaagtgctggacaatcaa
aacgtgtccaacggatgtgtgagtaaaattctgggcaggtattacgagactggctccatc
agacccagggcaatcggtggtagtaaaccgagagtagcgactccagaagttgtaagcaaa
atagcccagtataagcgggagtgcccgtccatctttgcttgggaaatccgagacagatta
ttgtccgagggggtctgtaccaacgataacataccaagtgtgtcatcgataaacagagtt
cttcgcaacctggctagcgaaaagcaacagatgggcgcagacggcatgtatgataaacta
aggatgttgaacggacagacaggaagctggggcacccgccctggttggtatccgggaaca
tcggtgccagggcaacctacgcaagatggctgccagcaacaggaaggagggggggagaat
accaactccatcagttccaacggggaagattcagacgaggcccaaatgcgacttcagctg
aagcggaagctgcaaagaaatagaacatcctttacccaagagcaaattgaggccctggag
aaagagtttgagagaacccattatccagatgtgtttgcccgcgaaagactagcggccaaa
atagatctaccagaagcaagaatacaggtatggttttctaatcgaagggccaaatggaga
agagaagaaaaactaaggaatcagagaagacaggccagcaacacacctagtcatattcct
atcagcagtagttttagcaccagtgtctaccagccaatcccacagcctaccacaccagtt
tcctccttcacctctggttccatgttgggccgaacagacacagccctcacaaacacgtac
agtgctctgccacccatgcccagcttcaccatggcaaataacctgcctatgcaacctcca
gtccccagtcagacctcctcatactcctgcatgctgcccaccagcccttcggtgaatggg
cggagttatgacacctacacccccccacatatgcagacacacatgaatagtcagccaatg
ggcacctcgggcaccacctccacaggtgggtgtacttgggattcaataggactcatttct
cctggtgtgtcagttcctgttcaagttcctggaagtgaacctgatatgtctcaatattgg
ccaagattacagtaa
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