Sorex fumeus (smoky shrew): 130040737
Help
Entry
130040737 CDS
T10594
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04136
Autophagy - other
sfum04140
Autophagy - animal
sfum04211
Longevity regulating pathway
sfum05010
Alzheimer disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05017
Spinocerebellar ataxia
sfum05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130040737 (ATG13)
04136 Autophagy - other
130040737 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
130040737 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
130040737 (ATG13)
05014 Amyotrophic lateral sclerosis
130040737 (ATG13)
05016 Huntington disease
130040737 (ATG13)
05017 Spinocerebellar ataxia
130040737 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
130040737 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130040737 (ATG13)
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130040737 (ATG13)
Membrane trafficking [BR:
sfum04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130040737 (ATG13)
Atg1 complex
130040737 (ATG13)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130040737 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
130040737
NCBI-ProteinID:
XP_055988717
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSHPCNYRATGEDTGVTY
PSVEDSQEVCTTSFSTSPPSQCVFTVTRAHSQSPTPVLTDTLRVPIAGLAFPYQLSSSRL
SYQPAALGVGSADLAYPVVYAAGLNATHPHQLMVPGKEGGVPLAPNQPAHGAQADQERLA
TYTPSDGAHGTATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTS
LDIPFAMFAPRHLELEDADPMVNPPESPSAASPLQGSLHSNGSSGGSSGNAHDDFVMVDF
KPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREF
DAFVETLQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagttcattaaatttttt
gcccttaagacagtccaagtgattgtgcaggctagacttggtgagaagatctgtactcgt
tcatcttcgtctccaactggatcagattggttcaatttagcaatcaaagacatcccagag
gttacacatgaagctaagaaggcactggcagggcagctgcccgctgtcgggaggtctatg
tgtgtggagatctcacttaagacttctgagggtgattccatggagttagaaatatggtgt
cttgaaatgaatgaaaagtgtgataaagagatcaaagtttcctacacggtatacaacaga
ctctcattgttgctgaagtctctcctggctataactagagtgacaccggcctacagactc
tccaggaagcaagggcatgagtatgtaatattgtacaggatatatttcggggaagttcag
ctaaatggtttaggagaaggtttccagacagttcgtgttgggacagtgggcacccctgtg
ggtaccatcactctttcttgtgcttatagaattaacttggcattcatgtctaccaggcag
tttgagaggacgccacctatcatggggattatcatcgatcattttgtggaccgtccctac
cccagctcctcacacccctgcaactacagagctacaggcgaggacactggggtgacatat
ccttctgtagaagattctcaagaagtgtgtaccacctctttttccacctcccctccatcc
cagtgtgtgttcactgtcacaagggcacattctcagagccctactcctgtgctgacggac
accctgagggtccccattgcaggactggcctttccctaccaactctcaagctctcgcctt
tcctatcagcctgccgccctgggtgttggatcagctgacctggcttatccagtagtgtat
gctgctggcctaaacgccactcaccctcaccagctgatggttcctggcaaggaaggtggg
gtcccccttgctcccaaccagcccgcccacggtgcccaggctgaccaagagagattggcc
acctacaccccttctgacggggcccacggcacagccacaccttctagcagtgaggacaca
gaaaccgtgtcgaacagcagcgagggacgggcctctccccacgatgtcttggagaccatc
tttgtccgaaaagttggggcttttgtcaacaaacccatcaaccaggtgaccctgaccagt
ttggacatcccctttgccatgttcgctcccaggcacttagagctggaggacgccgaccct
atggtgaatcctcccgagtcccccagcgctgcgtcccctctccagggcagtctgcactcc
aacggctccagcggtggcagcagcggcaacgcccacgatgactttgtcatggtcgacttc
aaaccggctttttctaaagacgacattcttccaatggacttggggaccttctaccgtgaa
tttcagaacccccctcaactgagcagcctctccatcgatatcggggcacagtccatggct
gaggacttggactctctcccggagaagctggccgtgcacgagaagaatgtgcgagaattc
gatgccttcgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
