Sorex fumeus (smoky shrew): 130040737
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Entry
130040737 CDS
T10594
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04136
Autophagy - other
sfum04140
Autophagy - animal
sfum04211
Longevity regulating pathway
sfum05010
Alzheimer disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05017
Spinocerebellar ataxia
sfum05022
Pathways of neurodegeneration - multiple diseases
Brite
Membrane trafficking [BR:
sfum04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130040737 (ATG13)
Atg1 complex
130040737 (ATG13)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130040737 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130040737
NCBI-ProteinID:
XP_055988717
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSHPCNYRATGEDTGVTY
PSVEDSQEVCTTSFSTSPPSQCVFTVTRAHSQSPTPVLTDTLRVPIAGLAFPYQLSSSRL
SYQPAALGVGSADLAYPVVYAAGLNATHPHQLMVPGKEGGVPLAPNQPAHGAQADQERLA
TYTPSDGAHGTATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTS
LDIPFAMFAPRHLELEDADPMVNPPESPSAASPLQGSLHSNGSSGGSSGNAHDDFVMVDF
KPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREF
DAFVETLQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagttcattaaatttttt
gcccttaagacagtccaagtgattgtgcaggctagacttggtgagaagatctgtactcgt
tcatcttcgtctccaactggatcagattggttcaatttagcaatcaaagacatcccagag
gttacacatgaagctaagaaggcactggcagggcagctgcccgctgtcgggaggtctatg
tgtgtggagatctcacttaagacttctgagggtgattccatggagttagaaatatggtgt
cttgaaatgaatgaaaagtgtgataaagagatcaaagtttcctacacggtatacaacaga
ctctcattgttgctgaagtctctcctggctataactagagtgacaccggcctacagactc
tccaggaagcaagggcatgagtatgtaatattgtacaggatatatttcggggaagttcag
ctaaatggtttaggagaaggtttccagacagttcgtgttgggacagtgggcacccctgtg
ggtaccatcactctttcttgtgcttatagaattaacttggcattcatgtctaccaggcag
tttgagaggacgccacctatcatggggattatcatcgatcattttgtggaccgtccctac
cccagctcctcacacccctgcaactacagagctacaggcgaggacactggggtgacatat
ccttctgtagaagattctcaagaagtgtgtaccacctctttttccacctcccctccatcc
cagtgtgtgttcactgtcacaagggcacattctcagagccctactcctgtgctgacggac
accctgagggtccccattgcaggactggcctttccctaccaactctcaagctctcgcctt
tcctatcagcctgccgccctgggtgttggatcagctgacctggcttatccagtagtgtat
gctgctggcctaaacgccactcaccctcaccagctgatggttcctggcaaggaaggtggg
gtcccccttgctcccaaccagcccgcccacggtgcccaggctgaccaagagagattggcc
acctacaccccttctgacggggcccacggcacagccacaccttctagcagtgaggacaca
gaaaccgtgtcgaacagcagcgagggacgggcctctccccacgatgtcttggagaccatc
tttgtccgaaaagttggggcttttgtcaacaaacccatcaaccaggtgaccctgaccagt
ttggacatcccctttgccatgttcgctcccaggcacttagagctggaggacgccgaccct
atggtgaatcctcccgagtcccccagcgctgcgtcccctctccagggcagtctgcactcc
aacggctccagcggtggcagcagcggcaacgcccacgatgactttgtcatggtcgacttc
aaaccggctttttctaaagacgacattcttccaatggacttggggaccttctaccgtgaa
tttcagaacccccctcaactgagcagcctctccatcgatatcggggcacagtccatggct
gaggacttggactctctcccggagaagctggccgtgcacgagaagaatgtgcgagaattc
gatgccttcgtagaaaccctgcagtaa
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