KEGG   Sorex fumeus (smoky shrew): 130040754
Entry
130040754         CDS       T10594                                 
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
  KO
K02599  Notch 1
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum01522  Endocrine resistance
sfum04330  Notch signaling pathway
sfum04658  Th1 and Th2 cell differentiation
sfum04919  Thyroid hormone signaling pathway
sfum05020  Prion disease
sfum05165  Human papillomavirus infection
sfum05200  Pathways in cancer
sfum05206  MicroRNAs in cancer
sfum05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    130040754 (NOTCH1)
 09150 Organismal Systems
  09151 Immune system
   04658 Th1 and Th2 cell differentiation
    130040754 (NOTCH1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    130040754 (NOTCH1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    130040754 (NOTCH1)
   05206 MicroRNAs in cancer
    130040754 (NOTCH1)
  09162 Cancer: specific types
   05224 Breast cancer
    130040754 (NOTCH1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    130040754 (NOTCH1)
  09164 Neurodegenerative disease
   05020 Prion disease
    130040754 (NOTCH1)
  09176 Drug resistance: antineoplastic
   01522 Endocrine resistance
    130040754 (NOTCH1)
SSDB
Motif
Pfam: EGF hEGF EGF_TEN EGF_CA EGF_2 Ank_2 Ank Notch NOD NODP Ank_4 Ank_3 Ank_5 EGF_3 cEGF JAG1-like_EGF2 EGF_Teneurin
Other DBs
NCBI-GeneID: 130040754
NCBI-ProteinID: XP_055988742
LinkDB
Position
Unknown
AA seq 2520 aa
MLRLLAPLLCLALLPALAARGLRCSQPGEACLNGGKCQVAANGTEACVCSSAFAGPRCQD
PNPCLSAPCRNGGTCLVAEHPGAPAYTCSCRLGFSGPLCLTPQDHACLNNPCRNGGTCDL
LTLSEYKCRCSPGWSGKTCQQADPCASNPCTNGGRCLAFEASFICTCPAGFHGRTCRQDV
NECSQSPAPCRNGGTCHNEVGSFRCACRPTHTGAHCELPFVPCSPSPCQNGGTCRPTGDT
THECACLPGFAGQNCEDNVDDCPGNSCRNGGTCVDGVNTYNCRCPPEWTGQYCTEDVDEC
QLMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACYSGATCHDRVASFYC
ECPHGSTGLLCHLNDACISDPCNEGSDCDTNPVNGKAICTCPSGYTGPACSQDVDECSLG
ANPCEHAGKCMNTLGSFECQCLQGYSGPRCEVDVNECVSSPCQNDATCLDQIGEFQCICM
PGYEGVHCEVNTDECASSPCLQNGRCVDKINEFLCECPTGFTGHLCQHDVDECASTPCEN
GAKCLDGPNTYSCVCTEGYTGPHCEVDINECDPDPCHYGTCKDGVAAFTCLCRPGYTGHH
CEANINECHSQPCRHGGTCQDRDNAYLCLCLPGTTGPNCEINLDDCASSPCASGTCVDKI
DGYECACAPGYTGNMCNIDIDECAAKPCHHGGTCVDAINSFICHCPEGFHGPTCLSEVNE
CSSDPCIHGTCRDGLNGYRCDCDPGWSGTNCDFNNNECESNPCANGGTCRDLSGGYACAC
RGGFSGPNCQTNINECASNPCLNQGTCMDDVAGYKCNCPLPYTGVTCEVVLAPCAPDPCR
NGGQCQESEDYESFSCACPAGWQGQTCEIDINECVKSPCRHGASCQNTRGGYRCHCRPGY
SGRHCEQDVDDCRPNPCHNGGSCMDGVNTASCACLPGFRGPFCEEDIDECASSPCLHGAN
CTDCVDSYTCTCPPGFSGIHCENNTPDCTESSCFNGGTCVDGINAFTCLCPPGFTGSYCQ
HDVNECDSRPCLHGGTCQDSYGAYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGRCWQTHT
QFRCECRPGWTGLRCDVPGVSCEEAARRRDVNVTQLCRNGGFCVNDSSTHHCRCQAGYTG
SYCEDQVDECSPSPCHNGATCTDYPGGYSCKCVPGYHGVNCSEEVNECLSHPCQNGGTCL
DLVNTYKCSCPRGTQGVHCEINIDDCHPPLDPVTRGPKCFNNGTCVDRVGGYSCTCPPGF
VGERCEGDVNECLSNPCDARGTQNCVQRVNDFHCECRAGHTGRRCESVIDGCRGRPCKNG
GSCAVASNTVRGFICKCPPGFEGATCENDARACGSLRCLNGGTCVSGPRSPTCLCLGTFT
GPECQFPASSPCEGRNPCYNQGSCEPTTESPFYRCLCPPKFNGLLCHILDYSFGGGAGRD
IAPPQVAEACELPACQEEAGNKVCSAPCNNHACGWDGGDCSLNFNDPWQNCSQALQCWKY
FSDGRCDAQCNSAGCLFDGFDCQRAEGQCNPLYDQYCRDHFSDGHCDQGCNSAECEWDGL
DCAGHVPERLAVGTLVLVVLVPPDQLRNHSLHFLRELSRLLHTNVVFKRDANGQHMIFPY
YGHEEELRKHPIKRSVDSTGGWPTLLSGNQGSRWRRELDPMDIRGSIVYLEIDNRQCALS
SSQCFQSAADVAAFLGALASLGSLNIPYKIEAVQSETVAPPPPPQLHFMYVAVAASLLLF
FVGCGVLLSRKRRRQHGQLWFPEGFKVSEAGKKKRREPLGEDSVGLKPLKNASDGALMDD
NQNEWADGDLETKKFRFEEPVVLPDLDEQTDHRQWTQQHLDAADLRVSAMAPTPPQGEAD
ADCMDVNVRGPDGFTPLMIASCSGGGLETGHSEEEEDAPAVISDFIYQGASLHSQTDRTG
ETALHLAARYSRSDAAKRLLEASADANIQDHMGRTPLHAAVSADAQGVFQILIRNRATDL
DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL
KNGANKDMQSNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDVAQERMHHD
IVQLLDEYSLVRSPPLPGPPALSPPLCSPNGYLGNLKAAPPGKKARKPSTKGLACGGKDA
KELKARRKKPQDGKGCLLDTSNVLSPVDSLESPHGYLSDVASPPLLPSPFQASPSMPLNH
LPGMPDTHLGLGHLGVAAKPEMATLGGSGRLAFEAGPPRLSHLPVASGTGPALGGGSGTA
MSFTLGGAAGLGGQCEWLSRLQNGLVPGQYGALRGAVAPSPLGVQAPTLQHSMMGPLHGG
LSASALSQMVSYQALPGARLAPQPHLVPAQPLQQAPAQPSLQMPQPGLQPQLSVTPASSS
HLGRGFLGGEPSQADGQPLGPGNLQAHTVLPQDPQGLAPPMTTAQFLTPPSQHSYSSPVD
GTPSHQLQVPEHPFLTPSPESPDQWSSSSPHSNISDWSEGISSPPTSTHAQMPHIPEAFK
NT seq 7563 nt   +upstreamnt  +downstreamnt
atgctgcggctcctggcgcccctgctttgcctggcgctgctgcccgcgctcgccgcacga
ggcctgcgatgctcccagcccggagaggcctgcctgaacggcgggaagtgccaagtggcg
gccaacggcacggaggcctgtgtgtgtagcagcgcctttgcgggcccacggtgccaggac
cccaacccctgcctcagtgcaccctgcaggaacgggggcacgtgcctggtggccgagcat
cccggtgccccggcctacacctgcagctgccgcctgggcttctctggacccctctgcctg
acgccccaggaccatgcctgcctcaacaacccctgccgcaatggcggcacgtgtgacctg
ctcacgctctctgagtacaagtgtcgctgcagccccggctggtcagggaagacgtgccag
caggctgacccgtgcgcctccaacccctgcaccaacggtggccgctgtctggccttcgag
gcctcgttcatctgtacctgcccggccggcttccacgggcgcacctgccggcaggacgtg
aacgagtgcagccagagcccggcaccctgccgcaatgggggcacgtgccacaacgaggtc
ggctccttccgctgcgcctgccggcccacccacactggtgcccactgcgagctgcccttt
gtgccctgcagcccctcgccctgccagaatggtggcacctgccgccccacgggcgacacc
acccacgagtgtgcctgcctgccaggctttgctgggcagaactgtgaggacaacgtcgat
gactgtccggggaatagctgcaggaacgggggcacctgtgtggacggcgtcaacacctac
aactgccgctgtccgccggagtggacaggccaatactgcactgaggatgtggacgagtgc
cagctgatgcccaacgcctgccagaacggtggcacctgccacaacacacatggcggctac
aactgtgtgtgcgtcaacgggtggacgggcgaggactgcagcgagaacatcgacgactgc
gccagcgctgcctgctacagcggggccacctgccacgaccgcgtggcctccttctactgc
gaatgcccgcatggaagcacaggcctgctgtgccacctcaacgacgcctgcatcagcgac
ccctgcaatgagggctccgactgcgacaccaatcccgtcaatggcaaggccatctgcacc
tgcccctcggggtacacaggccccgcctgcagccaggacgtggatgagtgctccctgggt
gccaacccctgtgagcatgccggcaagtgcatgaacactctgggctcgttcgagtgccag
tgtctgcagggctacagtggcccacgctgtgaggtggacgtcaacgagtgcgtgtccagc
ccgtgtcagaacgatgccacctgcctggaccagatcggagagttccagtgcatctgcatg
cccggctatgagggcgtacactgcgaagtaaacacggatgagtgtgccagcagcccctgc
ctgcagaatggccgctgtgtggacaagatcaacgagttcctgtgcgagtgccccaccggc
ttcaccggacacttgtgccagcatgatgtggacgagtgtgccagcaccccttgtgagaac
ggcgccaagtgcctggacggacccaacacctatagctgcgtgtgcaccgagggctatacg
gggccccactgtgaggtggacatcaatgagtgtgacccagatccctgtcactacggcaca
tgcaaggatggggtggctgccttcacctgcctgtgccggccgggctatacgggccatcac
tgcgaggccaacatcaacgagtgccacagccagccgtgccgccacgggggcacctgccag
gaccgtgacaacgcctacctgtgcctctgcctgccggggaccacaggccccaactgtgag
atcaacctggacgattgtgccagcagcccctgtgcctcaggcacctgtgtggacaagatc
gatgggtacgagtgtgcttgtgcaccagggtacacagggaatatgtgtaacatcgacatt
gacgagtgtgcggccaagccctgccaccatgggggcacctgtgtggacgccatcaacagc
ttcatctgccactgccccgagggcttccatggccccacgtgcctgtcggaggtgaatgag
tgcagcagtgacccctgcatccacgggacctgccgggatggcctcaatgggtaccggtgt
gactgtgacccaggctggagcggcaccaactgtgacttcaacaacaatgagtgcgagtcc
aacccctgtgccaatggtggcacctgtagggatctgagtggcggctatgcctgtgcctgc
cgcgggggcttcagtggccccaactgccagaccaacatcaacgagtgtgcctccaacccg
tgtctgaaccaaggcacgtgcatggacgacgtggccggctacaagtgcaactgcccgctg
ccctacacaggagtcacctgtgaggtggtgctggccccgtgtgcccccgacccctgcagg
aacggcggccagtgccaggagtccgaggactacgagagcttctcttgtgcgtgccctgcg
ggctggcaagggcaaacatgtgagatcgacatcaacgagtgcgtgaagagcccgtgccgc
catggcgcctcctgccagaacacgcgtgggggctaccgctgccactgccgccctggatac
agtggccgccactgcgagcaggatgtggatgactgccggcccaacccctgtcacaatggc
ggctcctgcatggatggggtcaacacggcctcctgcgcctgcctgcccggcttccggggc
cccttctgtgaggaggacatcgatgagtgcgccagcagcccctgcctgcacggcgccaac
tgcacggactgcgtggacagctacacctgcacctgccccccagggttcagcgggatccac
tgcgagaacaacactcccgactgcacggagagctcctgcttcaatggcggcacctgtgtg
gacggcatcaacgccttcacctgcctgtgcccacccggcttcacgggcagctactgccaa
cacgacgtcaacgagtgtgactcgcggccctgcctgcacggcggcacctgccaggacagt
tacggcgcctacaagtgcacctgcccccagggttacaccggcctcaactgccagaacctg
gtgcgctggtgcgactcctcaccctgcaagaatggcggccgctgctggcagacgcatacg
cagttccgctgtgagtgccggcccggctggacgggactccggtgcgatgtgccgggcgtg
tcctgcgaggaggctgcgcgccggcgagacgtcaacgtcacccagctgtgccggaacggt
ggcttctgcgtcaatgacagcagcacccaccactgccgctgccaggccggctacactggc
agctactgcgaggaccaggtggacgagtgctcgcccagcccctgccacaatggcgccacc
tgcaccgactaccccggtggctactcctgcaagtgcgtgcccggctaccacggggtgaac
tgttccgaggaggtcaatgaatgcctgtcccacccgtgccagaatggaggcacctgtctt
gaccttgtcaacacctacaagtgctcctgcccccgcggcacccagggcgtgcactgtgag
atcaacattgacgactgtcatccgccactggacccagtgacccggggccccaagtgtttc
aacaatggcacctgtgtggaccgagtcgggggctacagctgcacctgccctcctggcttc
gtgggcgagcgctgtgaaggggacgtcaacgagtgtctgtccaatccctgcgatgcccgt
ggcacccagaactgtgtgcagcgagtcaacgacttccactgcgagtgccgcgccggccac
actgggcgacgctgtgagtctgtcattgatggctgcaggggcaggccctgcaagaacgga
ggctcttgcgctgtggcctccaacaccgttcgtggattcatctgcaagtgcccaccgggc
tttgagggcgctacctgtgagaacgacgctcgtgcctgcggcagcctgcgctgcctcaac
gggggcacctgcgtctcgggcccgcgtagccccacctgcctgtgcctgggcaccttcacc
gggcccgagtgccagttcccggccagcagcccctgcgagggcagaaacccctgctacaac
caggggagctgtgagcccacgaccgagagccccttctaccgctgcctgtgtccacccaag
ttcaacgggctcctgtgccacatcctggactacagctttgggggtggcgccgggcgcgac
atcgccccaccgcaagtagccgaggcctgcgaactccccgcgtgccaagaggaggcaggg
aacaaggtgtgcagcgcgccctgcaacaaccatgcctgtggctgggacggcggcgactgc
tcgctcaacttcaacgacccctggcagaactgctcccaggccctgcagtgctggaagtac
ttcagcgacggccgctgcgatgcccagtgcaactcggctggctgcctatttgatggcttc
gactgtcagcgtgctgagggccagtgcaaccccctctacgaccagtactgcagggaccac
ttcagtgacggccactgtgaccagggctgcaacagcgctgagtgtgagtgggatggacta
gactgtgccgggcacgtgcctgagcgcctggctgtgggcaccctggtgttggtggtgctg
gtgcccccggaccagcttcgcaaccactccctgcacttcctgcgggagctgagccgcctg
ctgcacaccaacgtggtcttcaagcgtgacgccaatggccaacacatgatcttcccctac
tatggccacgaggaggagctccgcaaacaccccatcaagcgctcagtggacagcacgggc
ggctggccaacgctgctctcgggcaaccagggctcacgctggcgccgggagctggacccc
atggacatccgtggctccatcgtgtacctggagatcgacaaccggcagtgtgcactctcg
tcgtcccagtgcttccagagtgctgccgatgtggctgccttcctgggggcgctcgcctct
ctgggcagcctcaacatcccctacaagatcgaggccgtgcagagtgagacggttgcaccg
ccgccgcccccgcagctgcacttcatgtacgtggccgtggccgcctccctgctgctcttc
tttgtgggctgcggggttctgctgtcccgcaagcgccgacgccagcatggccagctctgg
ttccctgagggcttcaaggtgtcggaggccggcaagaagaagcggcgggagcccctgggc
gaggactccgtgggcctcaagcccttgaagaacgcctccgacggagcgctgatggacgac
aaccagaacgagtgggctgacggggacttggagaccaagaagttccggttcgaggagcca
gtggtccttccagacctggacgagcagaccgaccaccgtcaatggacacagcagcacctg
gacgcggctgatctgcgtgtgtcggccatggcacccacgccaccccaaggcgaggctgac
gccgactgcatggatgtcaatgtccgggggccagatggcttcacgcccctcatgatcgcc
tcctgcagtggagggggcctggagacgggccacagcgaggaggaggaggacgctccagcc
gtcatctcggacttcatctaccagggcgccagcctgcatagccagaccgaccgcaccggg
gagacggccctgcacctggctgcccgctactcgcgctccgacgctgccaagcgcctgctg
gaggccagcgcggacgccaacatccaggaccacatgggccggaccccgctgcacgctgcc
gtgtctgctgatgcccagggcgtcttccagattctgatccggaaccgggccacagacctg
gatgcccgcatgcatgatggcacgaccccactcatcctggccgcccgcctggcagtggag
ggcatgctggaggacctcatcaactcacatgccgacgtcaacgctgttgacgacctgggc
aagtccgccctgcactgggcagccgctgtgaacaatgtggatgcggcggttgtgctgcta
aagaatggcgctaacaaggacatgcagagcaacaaggaggagacaccgctgttcctggcc
gcccgggagggcagctatgagactgccaaggtgctgctggaccacttcgccaaccgggac
atcacggaccacatggaccggctgccacgcgacgtggcacaggagcgcatgcaccatgac
attgtgcagctgctggacgagtacagcctggtgcgcagcccaccgctgcccgggccacct
gccctgtcgcccccactctgctcgcccaacggctacctgggcaacctcaaggctgccccg
ccagggaagaaggcgcgcaagcccagcaccaagggcctggcgtgcggaggcaaggacgcc
aaggagctgaaggcccgcaggaagaaaccccaggacggcaagggctgcctgctggacacg
tccaacgtgctctcgcccgttgactccctcgagtccccgcacggctacctgtcggacgtg
gcctctccgcccctcctgccttccccgttccaggcgtcgccgtctatgcctctcaaccac
ctgcccggcatgcccgacactcacctgggcctcggccacctgggcgtggcagccaagccc
gagatggccacgctgggcggcagcggccggctggccttcgaggcgggcccgccccgcctg
tcccacctgcccgtggcctcgggcaccggcccggctctgggcgggggcagcggcacggcc
atgagtttcaccctgggcggtgctgccggcttgggcggccagtgtgagtggctctcgcgg
ctgcagaacgggcttgtgcccggccagtatggcgcgttgcggggagccgtggcccccagc
cccctgggcgtgcaggcccccacgctgcagcacagcatgatgggtcccctgcatggcggc
ctctcggccagtgccctgtcgcagatggtgagctaccaggccctgcccggcgcgcgcctg
gccccgcagccccacctggtgcctgcgcagccactccagcaggcgccggcgcagcccagc
ttacagatgccgcagccgggcctgcagccgcagctcagcgtcacacccgccagcagcagc
cacctgggccgcgggttcctgggcggggagcccagccaggcggatgggcagccgctgggc
cctggcaacctgcaggcgcacacggtgctgccgcaggacccccagggcctggccccgccc
atgaccacggcgcagttccttacaccgccctcccagcacagctactcctcgcccgtggac
ggcacccccagccaccagctgcaggtgcccgagcaccccttcctcaccccgtcccccgag
tcccccgaccagtggtccagctcctcgccgcactccaacatctccgattggtccgagggc
atctccagcccgcccaccagcacgcacgcccagatgccgcacattcccgaggccttcaag
taa

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