Sorex fumeus (smoky shrew): 130040762
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Entry
130040762 CDS
T10594
Symbol
MSX1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
130040762 (MSX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130040762 (MSX1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
130040762 (MSX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
130040762
NCBI-ProteinID:
XP_055988758
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MAPAADMTSLPLGVKVEDSAFGQPAGGGGGQGPGAAAAAPPAAMGADEEGAKPKVSPSLL
PFSVEALMADHRKPGAKDSALAASEGAPAAGGSAQPLGARPGPLGAPDAPASPRPLGPFS
VGGLLKLPEDALVKAESPEKAERTPWMQNPRFSPPPARRLSPPACTLRKHKTNRKPRTPF
TTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLK
MAAKPMLPPAAFGLSFPLGGPAAVAAAASASIYGASGPFQRAALPVAPVGLYTAHVGYSM
YHLT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggccccggctgctgacatgacttctttgccgctcggtgtcaaagtggaggactccgcc
ttcggccagccggcggggggcggcgggggccagggccccggcgccgcggcggccgcgccc
ccggccgcgatgggggccgacgaggaaggggccaagcccaaggtgtccccgtcgctgctg
cccttcagcgtggaggcgctcatggccgaccacaggaagcccggggccaaggacagcgcg
ctggccgcctcggagggcgcgccggcggccggcggctccgcgcagcccctgggcgcccgg
cccggacccctgggcgccccggacgcgccggcctccccgcggccgctcggccccttctcg
gtgggagggctcctcaagctgcccgaagacgcgctcgtcaaagccgagagccccgagaag
gccgagcgcaccccgtggatgcagaacccccgcttctccccgcccccggcccgccggctg
agccccccagcctgcaccctgcgcaagcacaagaccaaccgcaagccgcggacgcccttc
accacggcgcagctcctggctctggagcgcaagttccgccagaagcagtacctgtccatc
gccgagcgcgccgagttctccagctcgctcagcctcaccgagacgcaggtgaagatctgg
ttccagaaccgccgcgccaaggccaagagactgcaggaggccgagctggagaagctgaag
atggccgcgaagcccatgctgccgccggccgccttcggcctctccttcccgctcggcggc
cccgcggccgtggccgccgccgccagcgcctccatctacggcgcctcgggccccttccag
cgcgccgcgctgcccgtggcgcccgtgggactctacacggcccacgtgggctacagcatg
taccacctgacatag
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