Sorex fumeus (smoky shrew): 130040806
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Entry
130040806 CDS
T10594
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
130040806 (TTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfum03021
]
130040806 (TTF1)
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
130040806 (TTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
130040806
NCBI-ProteinID:
XP_055988823
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MEGEPGSLEGLSPVLDKKKKKKKRQFDSPGRESPEPLAPTGLGDSTLTEEQPGGAERKKG
SREALPPSHPLPEAQHSPEAAGLASVAPHRKKRKRSALGVDEETGVAYVLVDREDSENEP
ENLRRDVDVVYVDMSKVQGATPEPGAPDSSAAESSPQKEPEEQHSQAKKKKKKQPRDTEP
STPRGNDGEQLNPQGTPCHGPWGDEWESPRTPSPSQLRAFPVPETSPAPPPGQGHSKKAK
KKKRRVLSGSWDPEAPAAAPPEPTGSGPPEDQPVDSTEATAGPGAEKGSRKKTKKRQLRA
PGSGVAGSAPQGSPGHPLAEPEEGLRTAGVAESARPGPREEIPETPETEERPRERTGSQL
PDKSTKDQAQDAESTRPSEGPQDSGEDSGDSDVDLGSAVRQLQEFIPNISARAATTIKRM
YRDDLGRFKEFKAQGVTIKFGKFSVKENKQLEQNVHDFLALTGIESADKLLYTDRYPEEK
SAITDLKRKYSFRVHIGKGIARPWKLVYYRAKKMFDVNNYKGRYSPGEEEKLKAYHSLHG
NDWKKIGEMVERSSLSVALKYSQISSKRNRGAWSKEETQKLTKAVEEVILKKLTPQELSE
VDAKLQARPEHRLSIVRERLYKGISWVEVEARVETRNWMQCKSKWMEILTRRMTNGRRVY
RGLNALQAKVNLIERLYEINVEDANEIDWEDLAGAIGDVPPSYVQTKFYRLKATCVPFWQ
KKTFPEIIDYLYEVTLPLLKDKLEKLVEKRGTKMQTPAAPKPAFLFRDIFYADDDDDDDD
SEGGEESEGH
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaaccgggcagcctggaagggctcagtcccgtgcttgacaagaagaagaag
aagaagaagaggcagttcgactccccagggagggagagcccagagccactggcgcccacg
ggccttggggactccacgctgaccgaggaacagcccgggggcgctgagaggaagaagggg
agcagggaggccctgccaccctcgcacccactcccagaagcccagcacagccccgaggct
gcggggctagcttctgtggccccccacaggaagaagcggaaaagaagtgccttgggagtg
gatgaggaaacgggggtcgcatatgtcctggtggacagagaagacagtgagaatgagccc
gagaacttacggagggacgtcgatgtcgtgtacgtggacatgagcaaggtccaaggggcc
acccccgagcccggggcccctgactcctccgcagctgagagttcccctcagaaggagcct
gaggaacagcattctcaggccaagaagaagaagaagaaacagcctcgtgacacagagccc
agcacaccccgaggcaatgatggggagcagctcaacccgcaggggacaccctgccacggg
ccttggggggatgagtgggagagcccgcgcacacccagcccctcgcagctgagggccttc
cccgtgcccgaaacttctcctgctcccccgccaggacaggggcacagtaaaaaagccaag
aaaaagaagaggagggtgctttcggggagctgggaccccgaggccccagccgccgcgccc
cccgagcccacagggagcgggcccccagaggaccagccggtggatagcacggaggccacc
gcgggacccggtgctgagaaaggcagcaggaagaagaccaagaaaaggcagctgagagct
cctggaagcggggtggcagggtctgcaccccaggggagccccgggcacccacttgcagag
cctgaggaaggcctcaggaccgcgggggtggcagagagtgctaggcccgggccccgagag
gagatcccagagaccccagagacggaggagcggcccagggaacgcacggggtctcagctc
ccagacaagagcaccaaggaccaggcccaagatgccgagagcacacgcccgtcggaaggt
ccccaggactcaggcgaggactcgggtgactcagacgtggacctgggctcagccgtgagg
cagctgcaagagttcatccccaacatcagcgcccgcgccgccaccaccatcaagcgcatg
taccgggacgacctggggcgcttcaaggagttcaaggctcagggtgtcactatcaaattt
ggcaagttctctgtcaaagaaaataagcagctggaacaaaatgtgcacgatttcctggcg
ctgacgggcattgagagcgcagacaagctgctgtacacggacaggtacccagaggaaaag
tccgcgattaccgacctgaaaaggaaatactccttccgcgtgcacatagggaaaggcatt
gcccggccctggaaactcgtgtactatcgggcgaagaagatgtttgatgtcaataattac
aaaggcagatacagcccaggagaggaggagaagctgaaggcctaccactccctgcacggg
aacgactggaagaagatcggcgagatggtggaacgcagcagcctctccgtggccctcaag
tactcgcagatcagctccaagagaaatcgtggagcctggagtaaagaggagacgcagaag
ctgaccaaggctgtggaggaagtgatcctgaagaaactgactccccaggagctgagtgag
gtggacgcgaagctgcaggcgcgccccgagcaccgcctgtccatcgtgcgggagcgactc
tacaagggcatttcctgggtggaggtggaggcgcgtgtggagaccaggaattggatgcag
tgcaaaagtaagtggatggaaatcctcaccaggaggatgactaacgggcggcgtgtgtac
cgcgggctcaatgcgctgcaggccaaagtcaacctgattgaaagattgtatgaaatcaac
gtggaagatgccaatgaaatcgattgggaggatcttgctggtgccatcggtgacgtccct
ccatcgtacgttcaaaccaagttctacagactgaaagccacctgtgttcccttctggcag
aagaaaacgtttccagagatcatagactacctctacgaggtcaccctccctctgctgaaa
gacaagctggagaagctggtggagaaaaggggcaccaagatgcagacccccgcagcgccc
aagccggccttcctgttccgagacattttctatgccgacgatgacgacgacgacgatgac
agcgagggtggcgaggagagcgagggccactga
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