KEGG   Sorex fumeus (smoky shrew): 130040825
Entry
130040825         CDS       T10594                                 
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04010  MAPK signaling pathway
sfum04020  Calcium signaling pathway
sfum04721  Synaptic vesicle cycle
sfum04723  Retrograde endocannabinoid signaling
sfum04725  Cholinergic synapse
sfum04726  Serotonergic synapse
sfum04727  GABAergic synapse
sfum04728  Dopaminergic synapse
sfum04930  Type II diabetes mellitus
sfum05016  Huntington disease
sfum05020  Prion disease
sfum05022  Pathways of neurodegeneration - multiple diseases
sfum05032  Morphine addiction
sfum05033  Nicotine addiction
sfum05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    130040825 (CACNA1B)
   04020 Calcium signaling pathway
    130040825 (CACNA1B)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    130040825 (CACNA1B)
   04725 Cholinergic synapse
    130040825 (CACNA1B)
   04728 Dopaminergic synapse
    130040825 (CACNA1B)
   04726 Serotonergic synapse
    130040825 (CACNA1B)
   04723 Retrograde endocannabinoid signaling
    130040825 (CACNA1B)
   04721 Synaptic vesicle cycle
    130040825 (CACNA1B)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    130040825 (CACNA1B)
  09164 Neurodegenerative disease
   05016 Huntington disease
    130040825 (CACNA1B)
   05020 Prion disease
    130040825 (CACNA1B)
   05022 Pathways of neurodegeneration - multiple diseases
    130040825 (CACNA1B)
  09165 Substance dependence
   05032 Morphine addiction
    130040825 (CACNA1B)
   05033 Nicotine addiction
    130040825 (CACNA1B)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    130040825 (CACNA1B)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:sfum04040]
    130040825 (CACNA1B)
Ion channels [BR:sfum04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   130040825 (CACNA1B)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel Phage_TAC_15
Other DBs
NCBI-GeneID: 130040825
NCBI-ProteinID: XP_055988867
LinkDB
Position
Unknown
AA seq 2346 aa
MVRFGDELGGRYGGAGGGERARGGGAGGAGGPGPGGLPPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPE
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHQACFVNNTGSEVTDPVGDFPCGKEAPARQCEGDTECREYWRGPNFGITNF
DNILFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG
EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDAVL
KRAATKKSRNDLIHAEEGEDRFADLSAVGSPFTRASLKSGKTESSSYFRRKEKMFRFFIR
RMVKAQSFYWVVLCVVALNTLCVAMVHYHQPQRLTTALYFAEFVFLGLFLTEMSLKMYGL
GPRSYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWNSLR
NLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFREETPTTNFDTFPAAILTV
FQILTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQ
ELTKDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSRSPSVSSVSS
PRQQSSAKARSVWEQRASQLRLQNLRASCEALYSEMDPDERLRYATTRHLRPDMKTHLDR
PLVVEPGRGPAGCKARAEPAEPAEPAEPPRRHHRHRDKDRPMPERAQDGGASPAAPGPEG
AEPGVREERARPHRSRSKEAAATREPRAERRGPGPDSGRRHHRHGSPEHAEREPRRHRAH
RHDPAREPKDAAKGERRARHRGARPAPRDTEGADEPRKHRARHRAQEDAEKDAATGDCEP
EDRDKEKEPRNHQPKAPHYDLEAGGTPGVGSVHAMPSTCLQKVDEQPEDADNQRNVSRMG
SQPLDLSTCVHIPAPGVGPAGETSAMPSGVVDLESQAEGKKESEADDATRRPRPIVPHSS
MFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVQTDSSRNNVLKYMDYI
FTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIKS
LRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFF
YCTDESKELERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPM
VLKHSVDATYEEQGPSPGFRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSE
CSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLM
MKFYDAPHEYELMLKCLNIVFTSMFSMECVLKLIAFGVLNYFRDAWNVFDFVTVLGSITD
ILVTEIANNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFF
IYAIIGMQVFGNIALDDETSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNQACD
EHASASECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIR
VWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHF
TSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTV
GKVYAALMIFDFYKQNKTTRDQSHQAPGGLSQMGPVSLFHPLKATLEQTQPAVLRGARVF
LRQKSSASLSNGGAVQTQESGIKESVSWGTQRTQEVPYEAKIPLERGHSTEIPLAEPGKP
AVDVQMQSMALRGPDGEPHPGLESQGRAASMPRLAAETQPAPDTSPMKRSISTLAPQRPH
VTHLCNTTLERAPTGQPAPHHHHRCHRRRDRKQKSLEKGPSLCADADRAPSSAVGPGPPP
GEGSTGCRRERRQERGRSQERRQPSSSSSEKQRFYSCDRFGGREPPQPKPSLSSHPTSPT
AGQEPGPPRQGGGSVNGSSMLPTSGASTPGRSGRRQLPQTPLTPRPSITYKTANSSPVHF
TGAQSSLPAFSPGRLSRGLSEHNALLQREPLSQPLAPSSRIGSDPYLGQRLDSDATARPQ
PEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSSGGRARHSYHHP
DQDHWC
NT seq 7041 nt   +upstreamnt  +downstreamnt
atggtccgcttcggggacgagctgggcggccgctatgggggcgcgggcggcggggagcgg
gcgcggggcggcggggccggcggggcgggcggcccgggccccggggggctgccgccgggc
cagcgggtcctctacaagcagtcgatcgcgcagcgcgcgcggaccatggcgctctacaac
cccatcccggtcaagcagaactgcttcaccgtcaaccgctcgctcttcgtcttcagcgag
gacaacgtcgtccgcaaatacgccaagcgcatcaccgagtggcctccgttcgagtacatg
atcctggccaccatcatcgccaactgcatcgtgttggcgctggagcagcacctcccggag
ggcgacaagacgcccatgtccgagcggctggacgacacggagccctacttcatcggtatc
ttctgctttgaggcgggcatcaagatcatcgcactgggctttgtgttccacaagggctcc
tacctgcgcaacggctggaacgtcatggacttcgtggtggtgctcacagggatcctggcc
actgcaggcacagactttgatcttcgaactctgcgggccgtgcgcgtgctccggcccctg
aagctggtatctgggattccaagtttgcaggtggtactcaagtccatcatgaaggccatg
gtcccgctgctgcagattggcctgcttctcttcttcgccatcctcatgttcgccatcatt
ggtctggagttctacatgggcaaattccaccaggcctgtttcgtcaataacacaggttca
gaggtcacagacccagtgggcgacttcccctgtggcaaggaggcccccgcccggcagtgt
gagggcgacaccgagtgccgtgagtactggcgaggacccaacttcggcatcaccaacttc
gataacatcctgtttgccattctgacagtgttccagtgcatcaccatggagggctggacc
gacatcctatacaacacaaacgatgcggcaggcaacacctggaactggctctacttcatc
cccctcatcatcattggctccttcttcatgctcaacctggtgctgggcgtgctctcggga
gaatttgcgaaggagcgggagagggtggagaaccgcagggcatttctgaagctccgccgg
cagcagcagattgagcgggagctgaacgggtacctggagtggatcttcaaggctgaggaa
gtcatgctggcagaggaggacaagaatgcagaagagaagtcccctttggacgcagtgctg
aagagagcggccaccaagaagagccgcaacgacctgatacatgcagaggagggcgaggac
cgtttcgcggacctcagtgcagtcgggtcccccttcactcgtgccagcctcaagagcggg
aagacggagagctcgtcatacttccgtcggaaggagaagatgttccgcttcttcatccgg
cgcatggtcaaggctcagagcttctactgggtggtgctgtgtgtcgtggcccttaacaca
ctgtgtgtggctatggtgcactaccaccagccgcagaggctaaccactgcactgtacttt
gcagagtttgtcttcctgggcctcttcctcacagagatgtccctgaagatgtatggcctg
gggcctcggagctacttccgctcgtccttcaattgcttcgacttcggggtcattgtgggg
agcatctttgaagtggtctgggccgccatcaagccaggcacctcctttgggatcagtgtg
ctgcgagccctccgcttgctgaggatttttaaggtcacaaagtactggaactccctgcgg
aacttggtggtatctctgctcaactccatgaagtccatcatcagccttctcttcctgctc
ttcctcttcatcgtggtcttcgctctgctgggcatgcagctgtttggggggcagttcaac
tttagagaagagactcctacaaccaattttgataccttcccggccgccatcctcactgtc
ttccagatcctgacgggggaggattggaacgctgtcatgtatcacgggatcgaatcgcag
ggaggagtcagcaaaggcatgttctcctccttctacttcatcgtcctgacgctgtttgga
aactatactttactgaatgtctttctggccatcgccgtggacaacctcgccaatgctcag
gagctgacaaaggatgaagaagagatggaagaagcagccaatcagaagcttgctttgcag
aaggccaaagaagtggctgaagtcagccctatgtctgcggccaacatctccatcgctgct
tttgtaaagcaaactcgaggtactgtatctcgcagcccatctgtctccagcgtaagctca
cccaggcagcagagctcggccaaggcgcgctcggtgtgggagcagcgggccagccagctg
cggctgcagaacctgcgcgccagctgcgaggcgctctacagtgagatggacccggacgag
cggctgcgctacgccaccacgcgccacctgcggccagacatgaagacgcacctggaccgg
ccgctggtggtggagccgggccgcgggcccgcgggctgtaaggcccgggctgagcccgcc
gagccggccgagcccgccgagccgccgcgccggcaccaccggcaccgcgacaaggacagg
cccatgccggagcgcgcccaggacggcggcgcgagcccagctgcccccgggcccgagggc
gctgagccgggggtgcgcgaggagcgcgcacggccgcaccgcagccgcagcaaggaggcg
gccgcgacccgcgagccccgcgccgagcgccgcggcccgggcccggacagcggccggcgc
caccaccgccacggctcccccgagcacgcggagcgcgagccgcgccgccaccgcgcgcac
cggcacgaccctgctcgcgagcccaaggatgcggccaagggcgaacggcgcgcgcgccac
cgtggagcccggccagcgccccgggacaccgagggcgccgacgagccgcggaaacaccgc
gcgcggcaccgggcacaggaggatgctgagaaggacgcggccaccggggactgcgagccg
gaggacagagacaaggaaaaggagccgcggaaccaccagcccaaggcacctcactacgac
ctggaggccggtgggacgccaggcgtggggtctgtacacgcaatgcccagcacctgtctc
cagaaggtggacgagcagccggaggacgcagacaatcagcggaacgtcagccgcatgggc
agccagcccttggatctgagcacctgtgtgcacatccctgctccaggggtgggccctgct
ggggagacctcggctatgcccagtggcgttgtggacctggaaagtcaagccgaggggaag
aaggaatcggaggctgacgatgccacaaggcggccccggcccattgtcccgcacagctcc
atgttctgtctcagccccaccaacctgctccgccgtttctgccattacattgtgaccatg
cggtactttgaaatggtcattcttgtggtcattgccctgagcagcatcgcactggcagct
gaggaccccgtgcagacagattcctccaggaacaacgtcttgaaatatatggactacatc
ttcacaggcgtctttacctttgagatggtgataaagatgattgatctgggactactgctg
caccctggtgcctatttccgggacctgtggaatattctggactttattgtggtcagtggg
gccctggtggcctttgccttctcaggatccaaagggaaagacatcaacaccatcaagtcc
ctgagagttcttcgtgtcttacggcccctcaagaccatcaaacggctcccgaagctcaag
gccgtgtttgactgtgtggtgaactctctgaagaatgtcctcaatatcctcatcgtctac
atgctcttcatgttcatatttgctgtcattgctgtgcagctcttcaaagggaagttcttc
tactgcactgatgaatccaaggagctggagagggactgcaggggtcagtacctggactac
gagaaggaggaggtagaagctcagccccgtcagtggaagaaatatgacttccactatgac
aatgtcctctgggctctgctgacactcttcactgtgtcgacgggagaaggctggcccatg
gtgctaaagcactcagtagatgccacctacgaggagcagggcccgagcccgggatttcgc
atggagctctccatcttctatgtcgtctacttcgtggtcttccccttcttcttcgtcaac
atctttgtggctctgatcatcatcaccttccaggagcagggggacaaggtgatgtctgag
tgcagcctggagaagaacgagagggcttgcatcgactttgccatcagcgccaagcccctg
acgcggtacatgccccagaacaagcagtccttccagtacaagacatggacctttgtagtc
tcgccacccttcgagtacttcatcatggccatgatcgccctcaacacagtggtgctgatg
atgaagttctatgacgcaccgcacgagtatgagctcatgctgaagtgtctcaacatcgtg
ttcacctccatgttctccatggaatgcgtgctgaagctcatcgcctttggggtgctgaac
tacttccgagatgcgtggaatgtctttgactttgtcacagtgttgggaagtattactgat
attttagtaacagagattgcgaacaacttcatcaacctcagcttcctccgcctcttccgg
gccgcgcggcttatcaagctgctccggcagggctacaccattcgcatcctgctgtggacc
tttgtccagtccttcaaggccctgccctacgtgtgcctgctcatcgccatgctcttcttc
atctacgctatcataggcatgcaggtcttcggaaatattgctctggatgatgaaaccagc
attaatcggcacaacaacttccggacatttttgcaagccttgatgctgcttttcaggagt
gccactggggaggcctggcacgagatcatgctgtcctgtctcagcaaccaggcctgtgac
gagcacgccagtgccagtgagtgtggaagtgacttcgcctacttttacttcgtctccttc
atcttcctttgctcctttctgatgttgaacctctttgtggctgtgatcatggacaatttt
gagtacctcacgcgggactcttccatcctagggcctcatcacctggacgagttcatccgg
gtctgggctgagtacgacccggctgcgtgtgggcgcatcagttacaatgacatgtttgag
atgctgaagcacatgtccccgcccctggggctggggaagaagtgccccgcgcgtgttgcc
tacaagcgcctggttcgcatgaacatgcccatctccaacgaggacatgaccgtccacttc
acatccacactgatggccctcatcaggactgcgctggagatcaagctggctccagctggc
acaaagcaacaccagtgtgacgcagaattgaggaaggagatttcctctgtgtgggccaat
ctgccccagaagaccctggatttactggtgccacctcataaacctgatgagatgacagtg
ggaaaggtctatgcagcgctgatgatctttgatttctacaagcagaacaaaaccacgaga
gaccagagtcaccaagctcctggagggctgtcccagatgggcccggtgtccctgttccac
cctctgaaggcaacgctggagcagacacagccggcagtactccgaggagcccgggttttc
ctgcggcagaagagctcagcctctctcagcaatggcggggcagtacagacccaagagagt
ggcatcaaagagtctgtttcctggggcacccagaggacccaagaggtgccctatgaggcc
aagatacccctggaacgtggccactctactgagatcccgctagcagagccaggaaagcca
gctgtggatgtccagatgcagagcatggcccttcgaggccctgatggggaacctcaccct
ggactagagagccagggccgggcggcgtcaatgcctcgcctggctgctgaaactcagccc
gccccagacaccagccccatgaagcggtccatctctacgctggcgccccagcgccctcat
gtgactcatctctgcaacaccaccctggagcgtgctccaacaggccaaccggctccccac
caccaccaccgctgccaccgccgcagggacaggaagcagaagtctctggagaaggggccc
agcctgtgtgcagatgccgacagggcacccagcagcgcagtgggaccagggccgccccca
ggagagggctccacaggctgccggcgggagcgcaggcaggagcgtggccggtcccaggag
cgtaggcagccctcgtcctcctcctcggagaagcagcgcttctactcttgtgaccgtttt
gggggccgcgagcctccacagcccaagccttccctcagcagccaccccacgtctcccaca
gccggacaggagccaggaccacccagacagggtggtggttctgttaatgggagctccatg
ctgccaacttctggtgctagcaccccaggccgcagtgggaggagacaacttccccagacc
cccctgaccccccgccccagcatcacctacaagacagccaactcttcacccgtccacttc
acgggggctcaaagcagcctaccggccttctctcctggccggcttagccgtggcctttct
gaacacaatgccctgctccagagagagcccctcagccagcccctggcacctagctcccgg
atcggctctgacccttacctggggcagcgtctggacagcgatgctactgcccgcccccag
cccgaggacacactcaccttcgaggaggccgtggccaccaactctggccgttcctctcgg
acttcctatgtgtcttccctgacctcgcagtcccaccctctccgccgcgtacccaatggc
taccactgcaccctgggactcagctcgggcgggcgggcacggcacagctaccaccaccct
gaccaagaccactggtgctag

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