Sorex fumeus (smoky shrew): 130040850
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Entry
130040850 CDS
T10594
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130040850 (SEC16A)
Membrane trafficking [BR:
sfum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130040850 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
130040850
NCBI-ProteinID:
XP_055988910
LinkDB
All DBs
Position
Unknown
AA seq
2215 aa
AA seq
DB search
MQPPPQAIPSGVVGPPPAGNPPSTFWSSSPYRRQVAPSGPAAPLPCPVQPVTDPFAFSRQ
ALQGPAAGSAAHSGLPGMQGLASSTSLQHPGQPLRPLSAAHCSHGPLDPLPRPLSQPKPE
TSAFSSLVAPSAPPGLGMNRVTEAASSSETPVQTPLFLPQYIPTGPDMSVGGHNSGNVPG
PDRPCSGQNPHAAAAPPAAPSSFPPPAQPLPGQWGPAQGGPPPSSQHSWPCPEGPVPITV
PPASRATQFPASLHQGHEPLNPPVSVPAPGAGLSGNPSVTSLHPENAFRRDSRAGPGLAS
QELRPAPGMTWEQMPAPALANPAAQGNSSESHLHPQVGARLGHALPQGDLGALSMFFQGG
ETENEENLSYEKPGSAGPADLDGVTPNPGPGHPGSQSALLRSSNSESAQQGGDAQAYFSQ
SLGVQHERQTTKSVSLDPWGDPARVGAPEAASTQYENVEDLEFVQNQEVLPSEPLGVELA
PSDQPRYGPLPGPTSSKLSAPDAVPHPVRPDSASSGHSSRSLRTLPGAARPQDLVGTFIQ
QEVGKPEDEAPGSFFKQIDSSPIGGEVDETPGGQSYQSSLSQPPTPSPPKPTGVFQTSAN
SSFEPVRSHLVGVKPVEADRANMVGEVRDTHAQQKQSRAAAAPPDASPGNLEQPPDNMET
LYVPRDSPLPPATTREAGHGPSHAVGLPLDSVLPTPEKRPLTRAQGAVNCESPATTLWAQ
NELPDFGGNVLLAPAAPVLHVPVNPRPLEVIQPPDEGVFSQQPSSRTPLQGGDALGASEN
LENPPKMGEEEALPSQASFGSASLSPSLSTDPLADQLVLTAQLSNSPVSSRSPAKKSQCC
RDVGGGRSPGPAARLPGNAPFCLGPYPALPASLCHTIFPRVTHCSQVSGPPEMVSNLLAT
LLLQLSPLASKNLLPENPKMPENLLAQLLSSWAGGTAAPLVPPACSASGPGSVKASASSN
WEGTVGALDFSLPRTLEIPMRMHGLSRLDGSVSCQQSTATHPGPRAHNPDPLYQQVTRDA
QEPQGPEKAQLEPAPPPLPGHRAALSEPSDVGCPLGPGQSQNSAQPPASLATSDIGQQLP
LPRPPLTSSVAIAATASSQATVRPDQQWPQSPPPDYYYYRPLYDGYQPQYPSPYPPDPAV
GPLYYQDVYGMYDPRYRPYDSTASAYAESYRYPEPERPSSRASHSSDRPPARREYPEGYY
SSKGWSSQSDYYASYYSGQYDYGDLGRWDRYHYRSRFRDPRTYDQRYWHDAEYDMYRKDS
YAHGDRSDKYDDPWRYDPRFTGSFDDDPEPRRDPYGEEADRHSVHSEHSAQSLRSRRSSL
SSHSHQSQMYRGHHVTAGSYDAPPPPGSFHGDYTYGVYGGAFPEASWSTVEQAPSRPTSP
EKFPVPHLCARFGPGGQLIKVMPNLPSEGQPALVEIHSMESLLQHTPEQEEMRSFPGPLG
KDDTHKVDVINFAQKKATKCLQDENLLDKESASLLWNFIVLLCRQNGTVVGTDIAELLLR
DHKTVWLPGKSPNEANLIDFTHEAVERVEEEESVEAQLSFLGGQPPPASTLEKEVERFRE
LLLYGRKKDALESAMKNALWGHALLLASKMDSRTHAKVMTRFANSLPINDPLQTVYQLMS
GRMPAASTCCGDEKWGDWRPHLAMVLSNLSSNMDVESRTMVTMGDTLASKGLLDAAHFCY
LMAQLGFGVYTKKSTKLVLIGSNHSLPFPKFATNEAIQRTEAYEYAQSLGAQTCTLPNFQ
VFKFIYSCRLAEMGLATQAFHYCEVIAQSILAQPHDHSPVLISQLVQVASQLRLFDPQLK
ERPEEESFVEPAWLTQLQRVDEQVKEGSLVWRQDAAVPKCRPSSPSSDVGLCEGPGSALP
SGPGPDNPLLAPLMPAAEPLGQSVRLLPSAPQRLPGSQLALPTGVPMFPVPAPPGSVLGF
PEPSVPDPTALYPGPGLPPGGPPLQEPGATLQEAPGRHLVPELREGDVGGAPADLGPPRM
PQDYEPSVGWEPPPPAPSPIQDMKRAAPAKKEPKEPKKSSEPWFFSRWLYGKKRTEAYLP
DDKNKSIVWDEKKNRWVDVNEPEEEKKAPPPPPTSLLKAPQAAPPGPGGAPRASVNMFSR
KAAGSRARYVDVLNPGGTQRSDPALAPADFFAPLAPLPIPALVGGTQADADTLPSAEGPG
TEGEEPTAPGDAPVAGHPPGGAVPFYNPVQFTPVAATSGSSRAGRMGGRKQAALS
NT seq
6648 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccaccccaggccatcccttcgggtgtggtcggaccacctccagccgggaac
cctccgagcacattctggtcaagcagcccctacagacgacaggtggcacccagtggacct
gcggctcccctcccctgccctgtgcagcccgtcacggacccgttcgccttcagcagacag
gcactccagggccctgccgcgggcagcgcagcccacagcggcctgcctggcatgcagggc
ctggcctcgtccacctctcttcagcacccgggccagcccctgcgtcccctgagcgctgct
cactgttcccatgggcccttggatcctctgcctagacctctgtctcagcccaagccagaa
accagtgcattttctagcctagtggccccttcagctccaccagggctcggaatgaatagg
gttactgaggctgcttccagctctgaaaccccagttcagactccgctgtttctgcctcag
tacattccaacaggtcctgacatgtctgttgggggccataactctgggaacgtgccaggg
cccgataggccctgtagtgggcaaaacccacatgctgctgctgcacctcctgccgcaccc
tcctccttccctccacctgctcagcccctgccagggcagtgggggccagcccaggggggc
ccgcccccttcctctcagcactcctggccctgcccagaaggaccagtgcctatcacggtg
cccccggcctcccgtgctacccagttccctgcttccctgcaccagggccatgagccactc
aaccccccagtctctgtgccagcccccggggccggtctgagtggaaacccctcagtgaca
agcctgcatcctgaaaatgcgttcaggcgggattccagagccggacctggactggcaagc
caggaattgaggccagctccaggaatgacttgggagcagatgcccgcccctgccctggct
aaccccgctgctcagggaaacagctcagaaagccatctgcacccccaggtgggagccagg
ctgggccacgccctgccacagggggacttgggggccctctccatgttcttccaagggggc
gagacggagaacgaggagaacctctcatatgagaagccaggctccgcagggccggctgac
ctggatggtgtcacccccaaccctggacctggtcatcctgggtcccagtcagcgcttctc
agaagttccaacagtgagagcgcgcagcagggaggagacgcacaggcttatttctcacag
tctttgggtgtccagcacgagagacaaaccactaaaagcgtcagccttgacccgtggggg
gatccggcccgtgtgggagctcctgaggctgccagcacccagtatgagaatgtggaggac
ttagaatttgttcagaatcaagaagttctaccaagcgagcctctgggtgtggagctggcc
ccaagcgatcagcccagatacgggccccttcctgggccgaccagctccaagctcagtgcc
ccggatgcagtgccgcatcccgtgcgtcccgacagtgcttcctccggccatagcagcagg
agcctccggaccctccccggggcagccaggccccaggacttggttggcaccttcattcag
caggaagttgggaagcccgaggatgaggctccggggagttttttcaaacagattgattcg
tctcccatcggaggggaggtagatgagacccctgggggccagagttaccagagcagcctt
tcccagcccccaaccccgagtccccccaaacccacaggggtattccagacaagtgcaaat
agttcttttgaaccagtgagatcccatctggttggggtgaaaccagtggaagcagatcga
gctaacatggtgggggaggtgagggacacgcatgcccagcagaagcagtccagagcagcc
gctgctccgcccgatgcctccccgggcaacctggagcagccgccagacaacatggagacc
ctctacgtgccccgcgacagccctctgccaccagccacgaccagggaggccggccacggg
ccttcacacgctgtggggcttcctttggactctgtgcttccaaccccagagaaaaggcct
ttgactcgtgctcagggagctgtgaactgtgagagcccagcaaccactctctgggctcag
aacgagctgcctgattttgggggcaacgtcctcctagcccctgctgcacccgtgctccac
gtccctgtgaatcctcggcccctagaagtgattcagcccccagatgaaggggtcttcagc
cagcaaccaagctccaggacacccctgcagggtggagacgcccttggtgcctctgagaat
ctggagaacccccctaagatgggcgaggaggaggcccttccctctcaggcaagttttggc
tctgccagtctctcaccttccctgtccactgatcctctggctgaccagctcgtgctgact
gctcagctcagtaattctcccgtgtcttcacggagccctgctaagaagagccagtgctgt
agagatgtgggtggggggaggagtccgggcccagccgccaggctgcctgggaacgcgccc
ttctgcctgggaccctaccctgctctccctgctagcctctgccacaccatctttccccgg
gtcactcattgctcacaagtttctgggcctcctgaaatggtttctaatctgcttgccact
ttgctgcttcagctgtctccgctagcatcaaagaacctgcttccagaaaatcccaagatg
ccagagaacttgcttgcacagctgctcagtagctgggctggggggactgcagcgccctta
gtgccacctgcatgtagtgcatcgggacctggcagcgtgaaggccagtgcctccagcaat
tgggagggaactgtgggtgcccttgatttctcgctccccaggactttggagatccctatg
agaatgcatggcttgtcccgtttggacggttcagtttcctgtcagcagtccacagccaca
caccctgggcccagggcacataacccagaccctttgtaccaacaggtgacacgcgatgcc
caggagcctcagggcccagagaaagctcagctggagccagcgccacctcccctgccaggg
cacagagcggcactttcagagccttcagatgtggggtgcccccttgggccaggacagtct
caaaactctgcccagccacctgcaagcctggccacaagtgacataggccaacagctgcca
ctgcctcggccccctctgacctccagcgtggcaattgcggccactgcctcaagccaggca
accgtgcgcccggaccagcagtggccacagtcaccgcccccagactactactactaccga
cccctttacgatggttaccagccccagtacccctcgccgtacccgcctgaccctgccgtg
ggccccctctattaccaggatgtctatggcatgtatgaccctcgctaccggccctatgac
agcaccgcgtcagcgtacgccgagagctaccgctaccctgagcccgagagacccagttcc
cgcgccagccacagctccgaccggcctcctgccaggcgcgagtaccctgaaggttactac
agctccaaagggtggagcagccagagcgattactacgccagctactactcgggccagtac
gactatggagatttggggcgctgggatcgctaccactaccgctccaggttcagggacccc
cgcacctatgaccagaggtactggcacgacgctgagtacgacatgtaccggaaagacagc
tacgctcatggggacaggtccgataagtatgatgacccttggaggtacgacccccgcttc
accgggagtttcgacgatgaccccgagccccgcagggacccgtatggggaggaggcggac
cggcacagcgtgcatagcgagcactcggcccagagcttacggagccgccgcagcagctta
agctcacactcccaccagagtcagatgtaccgaggtcaccatgtgacagccggctcctat
gatgccccgcctcccccgggctcctttcacggtgactacacgtatggcgtgtacgggggt
gccttcccggaagccagctggtccacggtggaacaggcgccctcgagacccacctctcct
gagaaattcccggtgccgcacctctgtgcccgcttcggtcccgggggtcagctcattaag
gtgatgcccaacttgccatcagagggccagcccgcgctggtggagatccacagcatggag
agcctgctgcagcatacgccagagcaggaggagatgcgctcattccctgggcctctgggc
aaagatgacacgcataaagtggatgttattaattttgcacagaaaaaagctacaaagtgt
ttacaggatgaaaatttacttgacaaagaatctgcaagtcttctttggaattttattgtg
ctgttgtgcagacaaaatgggactgtggtgggaacagacatcgcggagctgctattacgc
gaccataagaccgtgtggcttcctgggaagtcgcccaatgaggccaacctgattgatttc
acccatgaggcggtcgagcgggtggaggaggaggagtcggtggaggcgcagctctccttc
ctgggtggccagccgcctcctgccagcacactggagaaggaagtcgagaggttccgggag
ctattgctgtacggccgcaaaaaggatgctctggaatccgccatgaaaaacgctttatgg
ggccacgctctgttgcttgccagtaagatggacagccggacacacgccaaggtcatgacc
aggttcgccaacagcctccccatcaacgaccccctgcagactgtctaccagctgatgtcg
ggccggatgcctgcagcgtccacgtgctgtggggacgagaaatggggggactggaggccg
cacctcgccatggttctgtccaacctgagcagcaacatggatgtggagtccaggacgatg
gtcaccatgggcgacaccctggcttccaaaggccttctggatgccgcccatttttgctac
ctcatggcccagctcggatttggggtgtacaccaagaaatccacgaagctggtcttgatt
ggctcgaaccacagtttgccgtttccgaagtttgcgaccaacgaagctattcagaggaca
gaagcctatgagtatgctcagtccctgggggcacagacctgcacgctccccaacttccag
gtgttcaagttcatctactcttgccgcctggccgagatggggctcgccacgcaggccttc
cactactgcgaggtcatcgcccagagtatcctggcccagccccacgaccactccccagtg
ctcatcagccagctggtccaggtcgcatcccagctgcgtctcttcgaccctcagctgaag
gagcggcctgaggaggagtccttcgtggagcctgcctggctgacccagctgcagcgtgtg
gatgaacaggtcaaggagggctctctggtgtggcgccaggatgcagccgtcccgaagtgc
cgtcccagctcacccagttccgacgtgggcttgtgcgagggtccaggatcagctctgcct
tcaggcccgggccctgacaacccactgctggcccccctgatgccagctgctgagcccttg
ggccagagtgtgcggctactgccttcagcgccacagaggcttcccggcagccagctagcc
ctccctacaggggtgcccatgtttcctgtgcctgcgcccccaggatctgtgctgggcttt
ccagaaccctcagtgcccgatcccacagctctgtaccccgggcctggcctgccacccggc
ggcccacctctccaggagccaggagcaacgctgcaggaggcccccggcagacacctggtc
ccggagctcagagaaggggatgtgggcggagcccctgctgatctgggtccccccaggatg
ccgcaggattacgagccctctgtggggtgggagccaccgcctcccgccccatcgcccatc
caggacatgaagagagccgcaccggccaaaaaggaacccaaggaacctaagaagagcagt
gagccctggttcttctcacgctggctctatggcaagaagcggaccgaggcgtacctgccc
gatgacaagaacaagtcgattgtctgggacgagaagaagaaccgctgggtggatgtcaat
gagccggaagaggagaagaaggctccgcccccaccccccacctcacttctgaaggctcca
caggctgcgcccccggggcctggaggggcccccagagcctctgtgaacatgttctctagg
aaagcagccggctccagggcgcgctatgtggacgtgttgaaccctgggggcacccagcgc
agtgacccggccctggcccctgcagacttcttcgccccgctcgccccactccccatccca
gcccttgtggggggcacgcaagcagatgcagatacactgccctctgcagaggggcccggc
acggaaggggaggagcccacggctccgggcgatgcccctgttgcagggcacccccccggg
ggggcagtgcctttctacaaccctgtgcagtttacaccagtggctgccacctcaggaagc
tcccgggcaggacgcatgggtggaaggaaacaggctgcgctgagctag
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integrated database retrieval system
