KEGG   Sorex fumeus (smoky shrew): 130040861
Entry
130040861         CDS       T10594                                 
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03410  Base excision repair
sfum04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130040861 (PARP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    130040861 (PARP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfum03400]
    130040861 (PARP4)
DNA repair and recombination proteins [BR:sfum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     130040861 (PARP4)
SSDB
Motif
Pfam: VIT PARP VIT_2 VWA_3 VWA BRCT BRCT_2 VWA_2 PTCB-BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 130040861
NCBI-ProteinID: XP_055988932
LinkDB
Position
Unknown
AA seq 1989 aa
MTVGIFANCTFCLKVKHLSRDQKKKLQTDIKENGGNFSLSLNSQCTHVIVDCMDVLSQHF
LKSTLKNHMHITSPDFVWESVRERRLLDVKNYDPNQLQKDTQTPEEVTMSSEEKIDDLPL
DSSSEEENIEEFTPFHSENVETPHFLPVFEVAKYNVLEKEEEGCLRIALLELRCAQEPTE
AAFAVFSVLLGPGPKAEKHSFVKKTAADASQCYENCIKKLRQEGFLLMARVRPEATQFGS
EQLQALLLEEEISSSTLSPEVSDLVEMIWTEALGHLEHVLLRSANTISLNDVNKAEGILL
LAKTALKNGETQEQLQKIMTEFNRLIPKKDATAKEVNLKTIAKDEDLCQLIRDMVNVCET
NLFKPNPPSLAKYRALRCKIKQVDQNTEEFISIKKELLQNYHSVDPVNILQMFRVGRVDE
TMEFQSQLGNVETLLHGSAAHSFVGILSRGLLLPKVVEDRGVKRTDIGNLGSGIYFSNSL
STSIKYSCPGETEGSRLLVICDVALGKCMDLEKRDFSLTKAPPGYDSVHGVAGPATDFED
DEFVVYNTNQIKMKYIIKFYVPGDEIKNFCPCNETELEEFETESPCFSVKDYQLPDTKSD
SSIKAGLQDTSGNLVPLEDVCIKGKIIDFIAQVVVFQTYSNQSHVPIEAKYIFPLEDKAA
VCGFEAFINGKHIVGEIKEKEEAHQEYREAISQGHGAYLMDQDSADIFTVSIGNLPPKGK
VLIKITYITELSIQGTAALFFIPASVAPWQQDKALNENIQDTVKKICVKEIGTEQSFSLT
MSIEMPYVIDFISSDTHELKQKRTDCTAVVSTMESSRLDSSGFCLRVGLTDAYLPRMWVE
KHPEKESEACMLVFQPKLDVALRGLVKQSEVIICLDCSNSMESAVFLEAKQIALYALSLV
GKKPKVNIIKFGTDYEELFPYPTYIKNKIEATEFIMTARPAMGNTDFWKVLRYLNLLYPS
RGFRNILLVSDGHLQNEGLTLRLVKKSVRHTRLFSCGVGSTANRHTLRILSQCGAGVFEY
FNSKSKHSWKKQIEAQITRFYSPSCHSVSIRWQQLSTCAPEPLQAPAQVQSLFHNERLLV
YGFIPHCTQACLCALIQEKEFSAMVSTTELQKTKGTMIHKLTARALIRDYEDGILHEDET
NHQMKKQKLKSLIIKLSKENTLITQFTSFVAVEKRDSDESSPNTPNIMTLIAEEDVDCLP
YMSWQEEQPQSCLLEVGDLVLEDQGLLNDTASDRSKEGIDLDMLYQEEQSGARVIEGVIA
KQPRSLSFEWSEDSQYQSSTKRKCLSSKLEVPECYKLIKLVDQESQRLDSELGGVDKALD
LSQVDSLKALGLKRRPKEATAMPPSPSFLKDLVDAACVPFCPVPAAQALHFDSPIPSPSV
LFSISPTLSHLGLPPSPPLLSSPTPQQLGPCPTAPLCLDSVSDSPIPSPSPPLFSSPTPQ
QLGSRHISPVCLNSVSDSPSPPPAFLCSSLALPQLDPPPSPPLFSSPTPQQLDPLPALQL
FSFSMLQQLGPPPAAPLFSSPTPPQLNAPSAPLHVSPPGLPEHTGYPPAPPFSSPVPLRQ
VCPPAPPLFSSPVPPQLDASPIPRLPSYSPSMVPSFTGAQAFSAPYGALAPVPLAGFAGT
ASQYGPLKSASVAPHLPSSPSFADGPGAGPHGTSLPLVLLDGAPSSQGQGTGTSTELHHR
LDSSSGLFGSTKGSAVKTNLKHVQRQEALPMWPAPPEVPAAHTLPFGSPLHCGSLPGSSA
TLSSLGSVLLEDSSDSCHLGISPSRQPPDPPSSDSQQMSGQTDSKTVPDSLQHDLLTATN
KKSHMETEIDGAQSRHLFSKKRKSRKPDRFSFFFQINKNQEHMSHTLKKGKNFLPWTELF
NLQTEDGFWKLTSELGDLLGLNISILSSFLDKKGIRSLGVKGRECLLDLIATFLVLQFLC
LTMEQEGINSLMKLNDASLFGHIPWAFKKIKKASEWVRKTEGQYPGICQRLELGKDWDLA
TKQLLGSNP
NT seq 5970 nt   +upstreamnt  +downstreamnt
atgactgtgggaatcttcgcaaattgtaccttctgtctgaaagtaaaacacctatcccgt
gaccaaaagaaaaagctacaaaccgacatcaaggaaaatggtggcaatttttccctttca
ctaaactctcagtgcacacatgtcatcgtggactgcatggatgtccttagtcagcacttc
ctgaagtccaccctgaagaaccacatgcacattacgagccctgattttgtgtgggaatct
gtcagagaaaggaggcttttggacgtgaagaattatgatcctaaccagctacaaaaagac
acacaaactcctgaagaagtgaccatgagttctgaagagaaaatagatgatctacccctg
gacagttcttcagaagaggaaaacattgaagaattcactccgtttcattcagagaatgtt
gaaactcctcattttcttcctgtttttgaagtggcaaaatataacgtcttggaaaaagag
gaagagggttgtctccgaattgcactcctagagctgcgctgtgcccaggaacccactgag
gctgcgtttgccgtcttctcggtcctcctggggcctggccccaaggctgaaaagcattcc
tttgtgaagaaaactgctgcagatgcaagtcagtgctatgagaactgcatcaagaagctg
aggcaggaaggattcctgttaatggcgcgagtcaggccagaagccacgcagttcggatcg
gaacagctgcaggcgttgcttttagaggaggagataagttcaagtactctaagcccggag
gtcagtgatttggtggaaatgatttggacagaagctcttggacacctggaacatgtgctc
ctcaggtcggccaacaccattagtctcaatgatgtaaacaaggcagagggaattctcctt
ctagcaaaaacagcacttaaaaatggagaaacacaagaacaacttcaaaaaataatgaca
gagttcaatagattgatacccaaaaaggatgcaactgctaaagaagttaacctgaaaaca
atagctaaagatgaagacctctgccagctaataagagacatggttaatgtctgtgaaacg
aatttgttcaaacccaacccaccatctcttgccaaataccgtgcattgaggtgcaaaatt
aaacaagttgatcaaaacactgaagaatttatcagtattaaaaaagagctattacagaat
taccacagtgtggatcctgtgaacatcctgcagatgtttcgagttggccgagtggatgaa
accatggagtttcagagtcagctgggcaacgtggagaccttgctgcatggctctgctgcg
cacagctttgtgggaatcctgtcccgcgggttgcttttacccaaagtagttgaagaccgt
ggtgtgaaaagaacggatattggaaatcttgggagtggcatatatttcagcaattcactc
agtacaagtattaagtactcatgcccaggagagacagaaggctccagactcctggtcatc
tgtgacgttgcccttggaaagtgcatggacttagagaagagggatttctccttaacgaaa
gcgccaccgggttatgacagtgtccatggtgtcgcaggaccagccacagactttgaggat
gatgaatttgtagtatataataccaatcagattaaaatgaagtatatcattaagttctat
gtacctggagatgaaataaagaacttttgtccttgcaatgaaactgaattagaggaattc
gaaactgagtctccatgtttttcagttaaagattaccagttgccagacaccaaatctgac
agcagcatcaaggccggccttcaagatacctctgggaatttggttcctctggaggatgtt
tgcatcaaggggaaaataatagactttatagctcaggttgttgtttttcagacatacagt
aatcaaagtcatgtgcctattgaagcaaaatacatttttcctttggaggacaaggcagct
gtgtgtggttttgaagccttcatcaatgggaagcacatagtgggagagattaaagagaag
gaagaagcccaccaggagtacagagaagccataagtcaaggccatggtgcatacctgatg
gaccaagactcagcggatattttcactgtcagcattgggaacttgcctccaaaaggtaag
gtgcttatcaaaatcacctacatcacggagctcagcatccagggcactgcggccctcttc
ttcattcctgcttctgtggcaccctggcaacaggacaaagctttgaatgaaaacattcag
gatacagtaaaaaagatttgtgtaaaagaaattggaacagagcaaagcttctcactgact
atgtccattgagatgccatatgtgattgacttcatttccagtgatacacatgaactgaaa
caaaagagaacagactgcacagctgtcgtcagcaccatggaaagcagccgcttagacagc
agtgggttttgccttcgcgttggtctgactgatgcctatctcccaagaatgtgggttgaa
aaacatccagaaaaagaaagcgaggcctgcatgcttgttttccaaccaaaacttgatgtc
gctctccgtggcctggtcaagcagagtgaagtgattatttgtcttgattgctccaattcc
atggagagtgcagtgtttttggaagccaagcaaattgctttatatgcactgtccttggtg
ggcaagaagccaaaggtcaacatcatcaagtttggcacagactacgaggagttatttcca
tatcctacctatatcaaaaacaaaattgaagcaactgagttcattatgacagcaagacca
gccatgggaaatacggatttctggaaagtgctccgttacttaaatctgctgtatcctagt
cgaggattccggaacattctccttgtctccgatgggcacctgcaaaacgaagggctgacg
ctgcgactggtaaagaaaagcgtcaggcacacgcggctgttctcctgcggggtcggttct
acagcaaaccgtcataccttaaggattttgtctcagtgtggtgccggagtgtttgaatac
tttaactcaaaatccaaacatagctggaaaaaacagatagaagcccaaatcaccaggttc
tactccccaagttgtcactctgtctccatcagatggcagcagctcagcacttgtgcccca
gagccactgcaggctcctgcccaggtgcagtccctgtttcacaatgagcggctcctggtc
tacggcttcatcccacactgcacacaggcatgtctgtgtgcattaatccaagagaaagaa
ttttctgctatggtatcaactactgaacttcagaaaacaaagggaacgatgatccacaaa
ctgacagcacgggctctaatccgagactatgaagatggcattctccatgaggatgagacc
aaccaccagatgaagaaacaaaagttaaagtctctgattattaaactcagtaaagaaaac
actctcataacacagttcacaagctttgtggcagttgagaaaagggatagtgatgaatcg
tcacctaatactccaaatattatgaccctcattgctgaagaagatgttgactgtctgccg
tatatgagctggcaggaagagcagccacagtcctgtttgctagaggttggggaccttgtt
cttgaggaccaaggtttgcttaatgacaccgcaagtgaccggtcaaaggaaggcatagat
cttgatatgctgtaccaggaggagcagtcaggggccagagtgatagagggagtcattgct
aaacagcctcgttcattgtcctttgaatggagtgaagattcgcaatatcaaagttccact
aaaaggaaatgtctttcatcgaagttggaagttcctgaatgttacaagttgattaagtta
gttgatcaagaatctcagcggctggattctgaacttggaggtgtggacaaggctttggat
ttaagtcaggtggattcacttaaagccctcggactcaaacgaagacccaaggaagccacg
gctatgcctccttcaccttctttcctgaaagatctggtggacgctgcctgtgttcccttc
tgtcctgtacctgctgctcaggcgctccactttgattctccgatcccatccccttctgtc
ctcttctccatctctcccaccctctcacatctgggccttcccccttctcccccactctta
agctctcccaccccccaacagctgggtccttgccctactgccccactctgccttgattct
gtttctgattctccaatcccatccccttctcccccactcttcagctctcccaccccccag
cagctgggttctcggcatatttccccagtctgcctcaattctgtttctgattctccaagc
ccaccccctgctttcctctgcagctctctcgccctcccacagctggatcctcccccttct
cccccactcttcagctctcccaccccccaacaattggatcctctccctgctctccaactc
ttcagtttttccatgctccaacagctgggtcctccccctgctgccccactcttcagctct
cccacgcccccacagctgaatgcaccctctgctcccttgcatgtcagccctcctggcctc
ccagagcatacaggctaccctcctgccccaccattcagctctcctgtccccctaaggcaa
gtctgcccccctgctcccccactcttcagctctcctgtccccccacagctagatgcttcc
cccatcccccgactgccctcttatagcccctcaatggtaccttcttttactggtgctcag
gcgtttagtgctccttatggtgccctagctcctgtccctcttgctggatttgcagggaca
gcttctcagtatggtcccctcaaatcagcttctgttgccccgcacttgccatccagtcct
tcctttgctgatggcccaggggctggtcctcatggcacttccctgccattggttcttctt
gatggtgccccatctagccaaggccaaggtactggcacttccacagagcttcatcacagg
ctggattcttcttctggcctatttgggtctactaagggttctgctgttaaaaccaatctc
aagcatgtacagaggcaggaagcactgcccatgtggcctgctcctcctgaagtccctgct
gctcacaccctccccttcggctccccgctgcactgtggctctctcccggggtctagtgct
accctttcttctctcggctctgttcttcttgaggatagctcagattcctgccacttgggg
atatccccttccagacagcctccagaccctcctagctcagattcacagcaaatgagtggg
cagacagacagcaaaacagtaccagattctctccaacatgatcttctgactgccacaaat
aagaaaagtcatatggaaacagaaattgatggagcacaaagtagacatcttttcagcaag
aagagaaaatctcgaaaaccagatagattcagttttttctttcagataaataaaaaccag
gagcatatgtcccacactctcaaaaaagggaagaatttcttgccttggactgaactcttc
aatctccaaacagaggatggcttctggaaacttacatcagaactaggggatctattaggc
cttaatataagtattttaagcagctttctagacaagaaaggcattcgatctctaggtgta
aaaggaagagagtgtctgttggacttgatcgccacttttcttgtgctgcagtttctttgc
ctcaccatggagcaggagggaatcaattcactgatgaaactgaatgacgcttctcttttc
ggacatattccttgggcatttaagaaaatcaagaaagcaagtgaatgggtaagaaaaact
gaaggacagtatccaggtatctgccaacgacttgagctgggtaaagattgggacttagcc
accaaacaactactgggatccaacccataa

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