KEGG   Sorex fumeus (smoky shrew): 130041095
Entry
130041095         CDS       T10594                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03013  Nucleocytoplasmic transport
sfum03015  mRNA surveillance pathway
sfum03040  Spliceosome
sfum05014  Amyotrophic lateral sclerosis
sfum05168  Herpes simplex virus 1 infection
Brite
Messenger RNA biogenesis [BR:sfum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     130041095
    TREX complex
     130041095
Spliceosome [BR:sfum03041]
 Complex C
  Other components
   EJC/TREX
    130041095
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    130041095
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz
Other DBs
NCBI-GeneID: 130041095
NCBI-ProteinID: XP_055989098
LinkDB
Position
Unknown
AA seq 224 aa
MSLEDIIKLNQNRGRTRSGGRGRGPVPNRAALAQGRGGNRTAPYSRPKQSPDKWQHDLLD
SGVGARARVEPAGKLLVSNLDFGVSDSDIQQLFAEFGTLKKAAVHYDRSGRSLGTAVVHF
QRKADALEARKQYHGVPLDGRPMNIQLVSPQMDTQRRPAQSVNGAGATRQRGSGGFGRVW
RGARGGRRAWSSGQQLSAEVLDAQLDAYKARSAKQQLSAKELDA
NT seq 675 nt   +upstreamnt  +downstreamnt
atgtctctggaggacatcatcaagctgaaccagaaccgcggccgcacccgctccggggga
cgtggccgcgggccggtcccgaaccgggcggccctggcccaaggccgtggcgggaaccgg
acggcgccctacagcaggcccaagcagagcccggacaagtggcagcacgacctcctggac
agcggcgtcggggcccgcgcccgcgtggagccggccgggaagctgctggtgtccaacctg
gacttcggggtgtcggactcggacatccagcagctgttcgccgagtttgggacgctgaag
aaggcggccgtgcactacgaccgctctggccgcagcctgggcaccgccgtggtgcacttc
cagcgcaaggcggacgccctggaggccaggaagcagtaccacggggtccccctggacggc
cgccccatgaacattcagctcgtctcgccccagatggacacacagcggagacccgcacag
agcgtgaacggagccggggccaccagacaacgcgggtccggaggcttcggcagggtctgg
agaggtgcccgcgggggccggcgcgcctggagctccgggcagcagctttctgcagaggtg
ctggacgcacagctggacgcctacaaggccaggagcgccaagcagcagctttccgcaaag
gagctggacgcatag

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