Sorex fumeus (smoky shrew): 130041149
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Entry
130041149 CDS
T10594
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04066
HIF-1 signaling pathway
sfum04137
Mitophagy - animal
sfum04140
Autophagy - animal
sfum04148
Efferocytosis
sfum04659
Th17 cell differentiation
sfum04919
Thyroid hormone signaling pathway
sfum05167
Kaposi sarcoma-associated herpesvirus infection
sfum05200
Pathways in cancer
sfum05205
Proteoglycans in cancer
sfum05208
Chemical carcinogenesis - reactive oxygen species
sfum05211
Renal cell carcinoma
sfum05230
Central carbon metabolism in cancer
sfum05231
Choline metabolism in cancer
sfum05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130041149 (HIF1A)
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Other DBs
NCBI-GeneID:
130041149
NCBI-ProteinID:
XP_055989159
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Position
Unknown
AA seq
826 aa
AA seq
DB search
MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNNNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECI
LKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTDT
DDQQLEEAPLYNDVMLPSSSEKIQNINLALSPLPASETPKPLRSNADPALNQEVALKLEP
NTESLELSFTMPQIQDQPVSPSDGSTRQSSPEPTSPSGYCFDVDSDMVNEFKLELVEKLF
AEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPQNASTITVFQ
PPTPMQESTISTATATTDELKAVTKDGMEDIKVLIASPSPTHISKETTSATTSPYSDTRS
RTASPNRAGNGVIEQTEKSHPRSPNVLSVTLSQRNTVPEEELNPKIIALQNAQRKRKIEH
DGSLFQAVGIVSLKGTLIQQPDNRTTTSSLSWKRVKGCKTSEQNGMEQKTIILIPSDLAC
RLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcgggcggcgcgaacgacaagaaaaagataagttctgaacgccgaaaagaa
aagtctagagatgctgcccgatctcgtcggagtaaagaatctgaagttttttatgaactt
gctcatcagttgccacttccccataatgtgagctcgcaccttgataaagcttctgttatg
agacttaccattagctatttacgtgtgaggaaacttctggatgctggtgatttggatatt
gaagatgaaatgaaggcacagatgaattgtttttatctgaaagctttggatggttttgtt
atggttctcacagatgatggcgacatgatttacatttctgataatgtgaacaaatatatg
ggattaactcagtttgaactgactggacacagtgtatttgactttactcatccatgtgac
catgaggaaatgagagaaatgcttacacacagaaatggccccgtgaaaaagggtaaagaa
caaaatacacaaagaagcttttttttgagaatgaagtgtaccctaactagccggggaaga
actatgaacataaaatctgcaacatggaaggtacttcattgcacaggccatattcatgtg
tacgataccaacaataatcagtctcagtgtgggtataagaaaccacctatgacgtgcttg
gtgctgatttgtgaacccattcctcatccatcaaatattgagattcctttagatagtaag
actttcctcagtcgtcacagcctggatatgaaattttcttactgtgatgaaagaattact
gaattgatgggatatgagccagaagaacttctgggccgctcaatatatgaatattatcat
gctttggactctgatcatttaaccaaaactcatcatgatatgtttactaaaggacaagtt
accacaggacagtacaggatgcttgcaaaaagaggtggttatgtatgggttgaaactcaa
gcaactgtcatatataacaccaagaattctcaaccacaatgcattgtgtgtgtaaattat
gttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgtatc
ctcaaaccagttgaatcttcagatatgaaaatgactcagctattcaccaaagttgaatcc
gaagacacaagtagcctctttgacaaacttaagaaggaacccgatgctttaactttgctg
gcacctgctgctggagacacaatcatatctttagattttggcagcaatgatacggacact
gatgaccaacaactggaagaagctccattgtacaatgatgtaatgctcccttcatcgagt
gaaaaaatacagaatattaatttggcactgtctccattacctgcttctgaaactccaaag
cctcttcgaagtaatgctgaccctgcactcaaccaggaagttgcattaaaattggaacca
aatactgagtcgctagaactttcttttacaatgccccagattcaagatcagccagtcagt
ccttctgatggaagcactagacaaagttcacctgagcctaccagtcccagcggatactgt
tttgatgtggatagtgacatggtcaatgaattcaagttggaattggtggagaaacttttt
gctgaagacacagaagcaaagaatccattttccactcaggatactgatttagacttggag
atgttagctccctatatccctatggacgatgacttccagttacgttccttcgatcagttg
tcaccattggagagcagttcttcaagccctcaaaatgcaagcacaattacagtattccaa
ccaccaactccaatgcaagaatctactatttccactgccactgccaccactgatgagtta
aaagcagtgacaaaagatggtatggaagacattaaagtattgattgcatctccatctcct
actcatatatctaaagaaactacaagtgccacaacgtcaccctatagtgatactcgaagt
cgaacagcttcaccaaacagagcaggcaatggagtcatagaacagacagaaaaatctcat
ccaagaagccctaatgtgttatctgtcactttgagtcaaagaaacactgttcctgaggaa
gaactaaatccaaagataatagctttgcaaaatgctcagagaaagcgaaaaatagaacat
gatggttcactttttcaagcagtaggaattgtaagtctgaaaggaacattaatacagcaa
ccagataaccgcacaactacttcatcgctttcctggaaacgagttaaaggatgcaaaacc
agtgaacaaaatggaatggagcagaagacaattattttaataccctctgatttagcatgt
cgattgctggggcaatcaatggatgaaagtggattgccacaactaacgagttatgattgt
gaagttaatgctcctatacaaggcagcagaaatctactgcagggtgaagaattactcaga
gctttggatcaagttaactga
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