Sorex fumeus (smoky shrew): 130041182
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Entry
130041182 CDS
T10594
Symbol
DTX4
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130041182 (DTX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130041182 (DTX4)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130041182 (DTX4)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130041182 (DTX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
WWE_5
zf-RING_2
zf-rbx1
zf-RING_5
zf_RING_Vps8
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
PHD_NSD
PHD
Motif
Other DBs
NCBI-GeneID:
130041182
NCBI-ProteinID:
XP_055989209
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVVRAGPRAGGSVVLGQVDSRLAPYIIDL
QSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGSWTPYDMEVGITIQHAYEKQ
QPWIDLTSIGFSYVIDFSTMGQINRQTQRQRRVRRRLDLIYPLVTGTLPKAPSWPASPAA
AASPPGPPCSCPQCVLVMSVKAAVVSPQKPPGARKNVPTAVNVPLKLPAPPGPGAKPLDG
TATLRGPVKTSPAQLARRQMSSAPTGATAGSPASPPGANGKPGRVALATLNRTNLQRLAI
AQSRVLIASGVPTVPVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVS
KSEIKSIPGVSNTSRKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLTAPSGY
KGPQPTIKPDLVGKLSRCGHIYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGK
MEYHLIPHSLPGHPDCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRK
VLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLA
ELAAQGISEDSMAQEKD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgctcctggcctcggccgtggtggtctgggaatggctgaacgagcacggccgctggcgc
ccctacagcccggccgtgagccaccacatcgaggcggtggtccgcgccggcccccgcgcg
gggggcagcgtggtgctgggccaggtggacagccggctggcgccctacatcatcgacctg
cagtccatgaaccagttccgccaggacaccggaaccctccgccccgttcgccgcaactac
tacgacccgtcgtcggcgcccgggaagggcgtggtgtgggagtgggagaacgacaacggg
tcctggacgccctacgacatggaggtgggcatcaccatccagcacgcctacgagaagcag
cagccctggatcgacctcacctccatcggcttcagctacgtcattgacttcagcaccatg
ggccagatcaaccggcagacgcagcgccagcgccgggtgcgccggcgcctggacctcatc
tacccactggtcacgggcacgctgcccaaagccccgtcgtggccggccagcccggccgcg
gccgcctcgccccctgggccgccctgctcctgcccgcagtgcgtgctggtgatgagcgtc
aaggcggccgtggtcagcccccagaagccccccggcgcccgcaagaatgtgcccaccgcc
gtcaacgtgccgctcaagctgcccgcgccgcccggccccggggccaagcccctggacggc
actgccaccctccgaggccccgtgaagacgtcccccgcgcagctggcccggcgacagatg
tccagcgcacccacgggggcgactgcgggctctccagccagccccccgggagccaatgga
aagcccggaagggtggccctggctaccttaaatcggaccaatctgcagcgactggccatt
gcccagtcccgggtgctgatcgcctctggggtccccaccgtcccagtgaagaacctcaac
gggtccagtcctgtcaaccctgccctggcaggaatcacggggatcctcatgagtgcagca
gggttgcccgtgtgcctcaccaggccaccgaaactggtcctccacccaccgcccgtcagc
aagagcgagatcaaatccatcccgggggtctccaacacgagccgcaagaccaccaagaaa
caagccaagaaaggtaaaaccccagaagaagtgctgaagaagtatctgcagaaagtgcga
cacccacccgatgaggactgcaccatctgcatggagcgcctcacagccccctccggttac
aagggcccacagccgaccatcaagcctgacctagttggaaagctgtccagatgcggccac
atctaccacatctactgcctggttgccatgtacaacaacggcaacaaggatgggagtttg
cagtgtccaacctgtaagaccatttatggggtgaagacgggcacccagccccccgggaag
atggagtaccacctcatccctcactctctgcctggtcaccctgactgcaaaactatcagg
atcatctatagcatccctcctggcattcagggaccagaacacccaaatcccgggaagagt
ttcagcgcccgtggcttcccaagacactgttatcttccggacagcgagaaagggagaaaa
gttctgaaactgctcctggtggcctgggaccgccgcctcatctttgccatcgggacttcc
agcaccactggcgagtcggacactgtcatctggaacgaggtccaccataagacggagttt
ggctctaatctcaccggccacggctacccagatgccaattacttggataacgtgctggcc
gagctggccgcccagggcatctccgaggacagcatggcccaggagaaggactga
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