KEGG   Sorex fumeus (smoky shrew): 130041269
Entry
130041269         CDS       T10594                                 
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum05206  MicroRNAs in cancer
Brite
Chromosome and associated proteins [BR:sfum03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    130041269 (DICER1)
   microRNA pathway
    RISC loading complex
     130041269 (DICER1)
SSDB
Other DBs
NCBI-GeneID: 130041269
NCBI-ProteinID: XP_055989305
LinkDB
Position
Unknown
AA seq 1876 aa
MAALQLLTPASSPMGPFFGLPWQQEAIPDNIYTPRKYQVELLEAALDHNTIVCLNTGSGK
TFIAVLLMKELSYQIRGDCQDNGKRTVFLVNSANQVTQQASAVRTHSDLKVGEYASLEGS
ASCTKEKWSQEFTKHQVLVMTCYVALNALKNGYFSLSDINLLVFDECHLAILDHPYREIM
KLCENYPLCPRILGLTASILNGKCDPEELGEKIQKLEKILKSNAETATDLVVLDRCTSQP
CEMVVDCGPFADRSGLYERLLMELEDALNFINDCNISVHSKERDSTLISKQILSDCREVL
VVLGPWCADKVAGMMVRELQKYIKQEQEGLHRKFLLFADTFLRKVHALCEQHFSPASLDL
RFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEVDDDDEEIEEKEKP
ETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPR
NKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVESGEADVEPVVDDEDT
FPPYVLRPDGPQVTINTAIGHINRYCARLPSDPFTHLAPKCRTQKLPDGTFYSTLYLPIN
SPLRDSIVGPPMDCVRRAERAVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEE
ETSVPGRPGSTKRRQCYPKAIPECLRESYPQPGQPCYLYVIGMVLTTPLPDELNFRRRKL
YPPEDTARCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQKLELITRLHQY
IFSHILRLEKPALEFKPTDADSAYCVLPLNVVNHSSTLDIDFQFMEDIEKSEARIGIPNT
KYSKESPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYY
KTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQI
LVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASEAGVGVRSLPVDFRYP
NLDFGWKRSIDSKSFISATSSSSAESDPHCKHSTTVAPDSAAHPGANPPSSPGSCRAAPP
AATVNGLAHHGNLANGSCDVANGDFCQGDELNYCRPEIPEQQPTSYSIQNFYNSANQPPP
QPSDECTLLSNKYLDGNANTSTSDGRPVAAAPLPGTPEAAVSAPWDRMELPQSPCPGHSP
RTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTFLFCTYPNAHEGRLSYMR
SKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSHSDKWGKDDLTKDCM
LANGKLEDAFGEDEDEDDDEEEEELTWRAPKEDPDYEDDILEYDQEHIKFIDNMLMGSGA
FVKKISLSAFAAAPDAAGEWKVPPKPPLGAAPFPSDFEDFDYSSWDAMCYLDPSKAGEED
DFVVGFWNPSEESCGAEAGKPCISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQL
FLCSLGLEVLPVLPRAPAAGGAPRPALWKDLEYGCLKIPPRCMFDHPDADRTLLQLISGF
SNFERKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQ
HSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMD
SELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFS
ANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAAR
RALRNLKANQPQVSNS
NT seq 5631 nt   +upstreamnt  +downstreamnt
atggcggctctgcagctcctgacccctgcttcctcaccaatgggtcctttctttggattg
ccatggcaacaagaagctattcccgataacatttatacgccaagaaaatatcaggtcgaa
ctgctggaggcagctctggaccataacaccatagtctgcttaaacactggctcagggaag
acgttcattgcagtgctactcatgaaggagctgtcctaccagatccgcggggactgccag
gacaatgggaagaggacggtgttcttggtcaactctgcgaaccaggtcacgcagcaggcg
tcagctgtccggacccactcggatctcaaggtgggggaatacgcgagcctcgaaggaagt
gcttcttgtacaaaggagaaatggagccaagagttcactaagcaccaggttcttgttatg
acttgttatgtcgccttgaatgctttgaaaaatggttacttttcactctcagacattaat
cttttggtgtttgatgagtgccatcttgcaatcttagaccatccctaccgagaaattatg
aagctctgcgaaaactacccactctgtcctcggattttgggactcactgcttccatttta
aatgggaaatgtgatccagaggaactgggagaaaaaattcagaaactggagaaaatcctt
aagagtaacgccgaaactgccacggacttggtggtcttagacagatgcacttctcagccc
tgtgagatggtggtggattgcggaccatttgctgaccggagtgggctgtacgagagactg
ctgatggagttagaagatgcacttaattttatcaatgactgtaacatatctgtacattca
aaagaaagagattctactttaatttctaaacagatactgtcggactgccgtgaggtcttg
gtcgtcctggggccgtggtgtgcggacaaggtggccggcatgatggtccgggagctgcag
aagtacatcaagcaggagcaggaggggctgcacaggaagttcctgctgttcgcagacacc
ttcctgcggaaggtgcacgcgctgtgcgagcagcacttctcgcctgcctcgctcgacctg
aggttcgtgactccgaaagtgatcaaactgctcgagatcttgcgcaaatacaaaccttac
gagcgccagcagttcgagagcgtcgagtggtacaataacaggaatcaggataattacgtg
tcttggagtgattccgaggtggatgacgacgacgaagaaattgaagagaaagagaagcca
gagaccaatttcccttctccgtttaccaacattttgtgcgggattatttttgtggagcgg
agatacacggcagtcgtcttaaacaggttgataaaggaggccggcaagcaagaccccgag
ctggcctacatcagcagcaacttcataaccggacacggcatcggaaagaaccagcctcgg
aacaaacagatggaagccgaattccgcaagcaggaagaggtacttagaaaatttcgggca
catgagaccaacctgcttattgcaacaagtattgtggaagagggtgttgatattccaaaa
tgcaacttggtggttcgttttgatttgcccacagagtatcgatcctatgttcagtccaag
gggagagccagggcccccatctctaattacataatgttagcagataccgacaaaatcaaa
agttttgaagaagacctgaaaacgtacaaagctattgagaagatcttgagaaataaatgt
tccaagtcagtcgagagtggtgaggctgacgtcgagcccgtggtggacgatgaggacaca
ttcccgccgtacgtgctgaggccggacggcccccaggtcaccatcaacacggccattgga
cacatcaacagatactgtgcgaggttacccagcgacccgtttactcatctagctccgaaa
tgtagaacccagaagttgcccgatggtacattttattcaactctttacctgccaatcaac
tcgcctcttcgagactccattgttggcccgcccatggattgcgtccgacgggccgagaga
gccgtggcactcatctgctgtgaaaaactgcacaaaatcggcgaactggatgaccacttg
atgcccgttgggaaagagacggtcaagtatgaagaagagcttgacttacacgatgaagaa
gagaccagtgttcccggaagaccaggttccacaaagcgaagacagtgctacccgaaagca
atcccggaatgcctgcgggagagctacccgcagcccggccagccctgctacctgtacgtg
atcgggatggtcctcaccacgccgctccccgacgagctcaacttccgacggcggaagctc
taccctcccgaagacactgcccgctgcttcgggatcctgaccgccaaacccatacctcag
attccgcacttccccgtgtacacgcgctccggggaggtcaccatatccatcgagctgaag
aagtccgggttcacactgtcgctgcagaagctggagctgatcacacggcttcaccagtat
atcttctcgcacattcttcggcttgaaaagcctgcactagaattcaagcccaccgacgcc
gactccgcgtactgtgtcctacctcttaacgttgttaatcactccagcactttggacatt
gactttcaattcatggaagacattgagaagtctgaagctcgcataggcattcccaacaca
aagtactcaaaagaatcaccgtttgttttcaaattagaagactaccaggatgcagttatc
attccaagatatcgcaattttgatcagccccatcgattttatgttgctgatgtatacact
gatcttaccccactgagtaaatttccttcccccgagtatgaaacgtttgcagaatattat
aaaaccaagtacaaccttgacctgaccaatctcaaccagcccctgctggacgttgaccac
acgtcatcaagactcaatcttttgacacctcgccatttgaatcagaagggaaaagcactt
cctctgagcagtgccgagaagaggaaagccaagtgggagagtctgcagaataaacagatc
ctggttccggagctctgtgcgatccatccaatcccagcatcactgtggagaaaggctgtt
tgtctccccagcatcctctatcgccttcactgccttctgaccgcagaggagctgagagcc
cagacggccagcgaggccggcgtgggggtccggtccctccccgtggacttcaggtacccc
aacctggacttcgggtggaagagatccatcgacagcaagtctttcatctcggccacgagc
tcctcttccgctgagagcgaccctcactgtaagcacagcacaactgtagcccctgacagt
gctgcccacccaggtgctaacccaccctcctcccccgggagctgcagggccgcgcccccc
gcggccaccgtcaacggcctggcccaccacggaaacctagccaacggcagttgcgatgta
gcgaacggagacttttgccaaggagacgagctgaattactgcaggccggaaatacctgaa
caacaacctacctcatattccattcagaatttctacaactctgcgaaccagcccccgccc
cagcccagtgatgaatgtactctgctgagtaacaaataccttgacggaaacgctaacaca
tctacctcagatggacgtcccgtggcggccgcgccgctgcctggtaccccggaggcggcg
gtcagcgcaccctgggaccggatggagctcccgcagagcccctgccccggccactccccg
aggactctgggtccgaaccccgggctcatcctgcaggcactcaccctgtccaacgccagc
gacggcttcaacctggagcggctggagatgctgggggactccttcctgaagcacgccatc
accaccttcctgttctgcacctatcccaacgcccacgagggccgcctgtcctacatgcgc
agcaagaaggtcagcaactgtaacctgtaccggctggggaagaagaaggggctgcccagc
cgcatggtggtgtccatatttgaccccccggtgaactggcttcctcccggctacgtggtc
aatcaagacaaaagccactcggataagtggggaaaagatgacctgacaaaagactgcatg
ctggccaacggcaagctggaggacgcctttggggaggacgaggatgaggacgacgacgag
gaggaggaggagctcacgtggagggcgcccaaggaggaccccgactacgaggacgacatt
ctggagtacgaccaggagcacatcaagttcatcgacaacatgctgatggggtcgggcgcc
ttcgtcaagaagatctcgctctcggccttcgccgctgcccccgacgccgcgggcgagtgg
aaggtgcccccgaagccgccgctgggggccgcgcccttcccgtccgacttcgaggacttc
gactacagctcgtgggacgccatgtgctacctggaccccagcaaggccggcgaggaggac
gacttcgtggtgggcttctggaacccgtcggaggagagctgcggcgccgaggcgggcaag
ccgtgcatctcgtacgacctgcacacggagcagtgcatcgccgacaagagcatcgccgac
tgcgtggaggccctgctgggctgctacctgaccagctgcggcgagcgcgccgcccagctc
ttcctctgctcgctggggctcgaggtgctgcccgtcctgccccgcgcccctgcggctggc
ggcgccccccgcccggccctctggaaggacctggagtacggctgcctaaagatccccccg
cgctgcatgttcgaccaccccgacgccgacaggacgctcctgcagctcatctcgggcttc
agcaacttcgagaggaagatcaactaccggttcaagaacaaggcgtacctgctgcaggcc
ttcacccacgcctcctaccactacaacaccatcacggattgctaccagcgcctcgagttc
ctgggagatgcgattctggactacctcataaccaagcacctttacgaggacccccggcag
cactccccgggggtgctcacggacctccgctcggcgctcgtcaacaacaccatcttcgcg
tcgctggccgtcaagtacgactaccacaagtacttcaaggccgtgtccccggagctcttc
cacgtcattgatgacttcgtgcagttccagctggagaagaacgagatgcagggcatggac
tcggagctcaggagatctgaggaggatgaagagaaagaagaggacatcgaggtccccaag
gccatgggggacattttcgagtcactggccggtgccatctacatggacagcgggatgtcg
ctggagaccgtatggcaggtgtactaccccatgatgcggccactcatagaaaagttttct
gcgaacgtgccccgttcccctgtgcgggagctgctcgaaatggaaccagagaccgccaag
ttcagcccagccgagagaacgtacgacggcaaggtgcgcgtgacggtggaggtggtgggg
aagggcaagttcaagggcgtgggccgcagctaccgcatcgccaagtcggccgccgccagg
agagccctgcgcaacctcaaagcgaatcaacctcaggtttccaacagctga

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