KEGG   Sorex fumeus (smoky shrew): 130041543
Entry
130041543         CDS       T10594                                 
Symbol
RIOX1
Name
(RefSeq) ribosomal oxygenase 1
  KO
K16914  protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
Organism
sfum  Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfum03009]
    130041543 (RIOX1)
   03036 Chromosome and associated proteins [BR:sfum03036]
    130041543 (RIOX1)
Enzymes [BR:sfum01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     130041543 (RIOX1)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     130041543 (RIOX1)
    1.14.11.79  protein-L-histidine (3S)-3-hydroxylase
     130041543 (RIOX1)
Ribosome biogenesis [BR:sfum03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    130041543 (RIOX1)
Chromosome and associated proteins [BR:sfum03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130041543 (RIOX1)
SSDB
Motif
Pfam: RIOX1_C_WH JmjC_2 Cupin_8 Cupin_1 Cupin_2
Other DBs
NCBI-GeneID: 130041543
NCBI-ProteinID: XP_055989762
LinkDB
Position
Unknown
AA seq 635 aa
MDGLRASGGLLRRGRLRRRRPPQPHSGSVLALPVRPRKIRRQLRRSVATRMAALRAQALP
SEDSEDSRVESAVQGAGDALRGDGAAALPDAARRDAYGHLGAGERREASPAARALPPQPA
RLGDAQPPPGRLGPTAAQPPPPPARLGEAPAAPARVADGAALLLPGPADGAAAEMPWDSP
LQRVLAELNRVPSSRRRAARLFEWLIAPMPPDHFYRRLWEREAVLVRRQDPTYYQGLFST
ADLDAMLRTEEVQFGQHLDAARYVNGRRETLNPPGRALPAAAWALYQAGCSLRLLCPQAF
SSTVWQFLAVLQEQFGSMAGSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRH
PAEELALTSSPNFSQEDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQ
RNTWGDFLEAVLPLAVQAAMEENVEFRRGLPRDFMDYMGAQHSDSKDPRRTAFMEKVRVL
VARLGHFAPVDAVADQRAKDFIHDSLPPVLTDRERALSVYGLPIRWEAGEPVNVGAQLTT
ETEVHMLQDGIARLVGEGGHLFLYYTVENSRVYHLEEPKCLEIYPQQADAMELLLRSYPE
FVRVGDLPCDSVEDQLSLATMLYDKGLLLTKMPLN
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggacggactccgggccagcggcgggctgctgcggcgcgggcggctgaggcgccggcgc
ccgccgcagccccacagcgggtcggtcctggcgctgccggtgcgacccaggaagatccgc
cggcagctgaggagaagcgtggcgacccgcatggccgcgctgcgggcccaggcgctgccc
agcgaggactcggaggactcgcgagtcgagtcggcggtccaaggggccggagacgcgctc
cgcggcgacggcgcggcggcgctcccggacgcggcccggcgagatgcgtacggccacctg
ggggccggcgagcggcgggaggcctcgcccgcggcccgcgcgctgcccccgcagccggcg
cgcctgggggacgcgcagcccccgccggggcgcctggggccgaccgcggcgcagccaccg
ccgccacccgcgcgcctgggggaggcgcccgccgcgccggcccgcgtggcggacggcgcg
gccctgctcctgcccggccccgcggacggcgcggccgcggagatgccctgggactcgccg
ctgcagcgcgtcttggccgagctgaaccgcgtccccagcagccggcggcgggcggcgcgc
ctcttcgagtggctcatcgcgcccatgccgcccgaccacttctaccggcgcctgtgggag
cgcgaggcggtgctggtgcggcgccaggaccccacctactaccagggcctcttctccacg
gccgacctggacgccatgctacgcaccgaggaggtgcagttcgggcagcacctggacgcc
gcgcgctacgtcaacgggcggcgcgagaccctgaaccccccgggccgcgccctgcccgcc
gccgcgtgggccctgtaccaggccggctgctccttgcgcctcctctgcccccaggctttc
tcgtccaccgtgtggcagttcctggccgtgctccaggagcagttcggcagcatggcgggc
tccaatgtctacctcaccccccccaattcgcagggctttgccccccactacgacgacatc
gaggctttcgtgctgcagctggagggccgcaaactctggcgcgtctaccggccccggcac
ccggctgaggaactcgccctgacgtccagccccaacttcagccaggaggacctcggggag
cccgtgctgcagacggtgctggagcctggagatctgctctatttccctcgtggcttcatc
caccaagccgagtgccaggatggcgtgcactccctacacctcaccttgtccacataccag
cgcaacacctggggcgacttcctggaggccgtgctgcccctggccgtgcaggctgccatg
gaagaaaacgtggagtttcgtaggggcctgcccagagacttcatggattacatgggggcc
cagcactccgattctaaggatccgcggagaacagctttcatggagaaggtgcgggtcttg
gttgcccgcttgggacactttgcgcctgtggatgcagtggctgaccagcgagccaaagac
ttcatccacgattctctgcccccggtgttgactgacagagagcgagcgctcagtgtttat
gggctccccattcgctgggaggctggagaacctgtaaacgtgggagcccagttgacgaca
gaaacagaagtgcacatgctccaggacggtatagctcggctggtgggggagggaggccat
ttgtttctctattacacggtagaaaactcccgtgtttatcatctggaagaacccaagtgc
ttggagatatacccacagcaggccgatgccatggaactcttgcttcgctcctatccagag
tttgtcagagtgggggacctgccctgtgacagtgtggaggaccagctgtccttggcaaca
atgctgtatgataaggggctgctgctcaccaagatgcctctgaactga

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