Sorex fumeus (smoky shrew): 130041591
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Entry
130041591 CDS
T10594
Symbol
PALS1
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04390
Hippo signaling pathway
sfum04530
Tight junction
sfum05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
130041591 (PALS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130041591 (PALS1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
130041591 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
130041591 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
PDZ domain-containing proteins
MAGUK family proteins
130041591 (PALS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
130041591
NCBI-ProteinID:
XP_055989831
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MTTSHMNGHVTEESDSEVKNVDLASPEEHQKHREMAVDCPGDLGTRMMPVRRSAQLERIR
QQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNPIFDTEEGIVLESPHYAVK
ILEVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQNAFKIHNAVTVHMNKASPPF
PLISNAQDLAQEVQTVLKPVHQKEGQELTTLLNAPHIQALLLAHDKVAEQEMQLEPITDE
RVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPPAKETVIHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDHEVAGRDYHFVSRQAFEADV
AAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKILRNSDLKPYIIFIAPP
SQERLRALLAKEGKNPKPEELRDIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcccatatgaatgggcacgttactgaggaatcagacagcgaagtaaaaaat
gttgatcttgcatcaccagaggaacatcagaagcaccgagagatggctgttgactgccct
ggagatttgggcaccaggatgatgccagttcgtcgaagtgcacaattggagcgtattcgg
caacaacaggaagacatgagacgtaggcgagaggaagaagggaaaaaacaagaacttgac
ctcaattcctccatgagacttaagaaactagcccaaattcctccaaagactggaatagat
aatcctatatttgatacagaagaaggaattgtcttagaaagccctcattatgctgtgaaa
atattagaagtggaagacttgttttcttcacttaaacatatccaacatactttggtagat
tctcagagccaggaggatatttcactgcttttacaacttgtacaaaataaagatttccag
aatgcatttaagatacacaacgctgtcacagtacacatgaacaaggccagtcctccattt
cctcttatctccaatgcacaagatcttgcacaagaggtacaaactgttttgaagccagtc
catcagaaagaaggacaagaattaactaccttattgaatgctccacatattcaggcactt
ttactggctcatgataaggtcgctgagcaagaaatgcagctggagcccattacagatgag
agagtctatgagagcattggtcagtatggaggagaaactgtaaaaatagttcgtatagaa
aaggctcgagatattcctttgggagctacagttcgtaatgaaatggattctgtcatcatc
agtcggatagttaaaggaggtgctgcagaaaaaagtggcctgttacatgaaggagatgaa
gttctggagattaatggcattgaaattcggggtaaagatgtcaatgaggtttttgactta
ttgtctgatatgcatggtactttgacatttgttctgattcccagtcaacagattaaacct
cctcctgccaaggaaacagttatccatgtaaaagctcattttgactatgacccatctgat
gacccttacgttccatgtcgggagttaggtctctcttttcaaaaaggggatattcttcat
gtgatcagtcaagaagatccaaattggtggcaggcttacagggaaggagatgaagataat
caacctctagctgggcttgtgccagggaaaagttttcagcagcaaagggaagccatgaag
caaaccattgaagaagataaggagccagaaaaatcaggaaaactatggtgtgcaaagaaa
aataaaaagaaaagaaaaaaggttttatataatgccaataaaaatgatgattatgacaat
gaggaaatcttaacttatgaagaaatgtcactttatcatcagccagcaaatcggaaaagg
ccaatcattttgattggtccacagaactgtggccagaatgaactgcgtcagagactcatg
aataaagaaaaagaccgctttgcatctgcagttcctcataccactcgcagtaggcgagac
catgaagtagctggtagagattatcactttgtttcacgacaagcatttgaggcagatgta
gcagctggaaagttcattgagcatggtgaatttgaaaaaaatttgtatggaaccagcatt
gattctgtgcggcaagtgatcaactctggcaaaatatgccttttaagcctccgtacacag
tcattgaagatactccggaattcagacttgaaaccatatattatcttcattgcaccccct
tcacaagaaagacttcgggcattattggcaaaagagggcaagaatccaaagcctgaagaa
ttaagagacatcattgagaagactagagaaatggagcagaacaatggccactactttgac
acagcaattgtgaattcagatcttgataaagcctatcaggaattgcttaggttaatcaac
aaacttgatactgaacctcagtgggtgccttccacttggctacgatga
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