Sorex fumeus (smoky shrew): 130041627
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Entry
130041627 CDS
T10594
Symbol
TTC6
Name
(RefSeq) tetratricopeptide repeat protein 6
KO
K24929
tetratricopeptide repeat protein 6
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
130041627 (TTC6)
Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
130041627 (TTC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_17
TPR_11
TPR_9
TPR_16
TPR_12
TPR_19
ARM_TT21_N
TPR_CcmH_CycH
TPR_6
ANAPC3
NatA_aux_su
ChAPs
TPR_10
ARM_TT21
TPR_21
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
130041627
NCBI-ProteinID:
XP_055989878
LinkDB
All DBs
Position
Unknown
AA seq
1847 aa
AA seq
DB search
MDSVRKHFGLKHRDEEYIFREHEKLRRASKKHSLRLKQELERRPTVDRGLRGPYEVSPES
KEKSDVCDPPQKPPSGSSRASRTSVRSLRPRGRRPWARSPQVAPFRLRDFYMSSSAFLRY
QLQPLPPLIAPEAGTTRAVMLAAPSARRDRSWTASVAPKSSKSSILKPAEEPPLQQSSKK
PELLPLQEPRLGRTRHSSSVSSVDSDLTATLLQRRVRFHPHFRRQSSSASVEPGGEVAEV
SPRADQEPRVRLSQKPQLSARPAGYTMPTMVEEVIASLHSEAQLATDRTFKELIWSILGP
TYDLATDVDVGERDRGVLVLSGQYAFRVGREMMLVPEDETLHYFENNPNGFSSFAEPVSE
ELYGVHSSDFQLEPEDAIEWGMSDTESLLKSQETFEIVPVTESSKPLESEEPASDSKAAQ
RLSLKEKSLELLQIRGKEIKHIRRAKLEISEEKRLKSLKFLRRKKLRVKRIPGGHTLPTL
HVLCKTFPAHQLPLHLSLASRIYHTPSRKGHETLVGQLGDSLFESCIGDEEENDRLLHGI
PNVDNEEENAAILTRPPAHTPQLQLLGKEMSAYPGFTKFLWNSASSKFYVPVSVIKETVY
PKYEHFILKKAASFHNIQKYFSIKSLQLKRAKSAIELRMEEKATVPFEIKNDMQSNIREV
LFQRAKELERYKTIHTESDKTVRKSIDTILARMQENTKSGSLSVSLVEASRQAGISYIVY
PKKMKKKEKNLRFGRLPFVYDELAKPPKTLQRSVSQEILPGQKKFLLRVPVYERQLRSPS
LPMVLNFDEFVLKKGGNPKTAGLRSWVFNLFSKYTYHKEGPKIPKMTTPKEYTLVKKLPI
LELSDSLESDLAPEVIKHYNSEVEKLTEEINNKTTYPAFSYCRRGAIYRKLGKLQSAMHD
LEKAILLEPLFLNAYWHRHFIYLFQDKFNEALDDLNYINKHNKYNAEAYLSKAEIFKARN
DITLAILNYTQAIKCKPTDADAYFRRGELYEMENKILAIDDFSKCIFYDPKRTDALMKRG
LFYYENEMWQPAIQDFTDLINVDPQNSQARTYRGRAYYKRNLFRQATEDFSFAIHLDPNN
WLAMYYRACLYRKTKPMRALQDYSVSALINDGYENLNCFLHRGILYAELKFWLMALCDFE
FVISLDRNFVAAYINIGLIYLMYLDNYIEAIRNFSEAIKIDPFNIQSYICQAQAYDKLHK
LTRSLKEISRAIHLQPDEVQLYIIRGQYLVKMKCYDLAKFTIQQVTEMNKGLVNLSPLQK
ALVYSFCDKYDKAIQVLDGITLQKPEITTYTLLAKTLMKAKRNKEALKMFKKALGVFSHS
TKGPDATEASADCLYHLGLCYVDEGNSQMAYDCFTKAVKAKPDFAEGFYQRGLCKVKLGK
NYPILDFNRAITLDSNHYQAYLSRAAYYGLKGRYSKAILNCNEAIKICSQNVFAYIYRGV
LKYYNKTYKLAIIDLTIAVSMDKNSYIAFYNRAICYTRVSEYTKALIDYGTVLLLDSGET
IVLNTFINRGRIYTELEQYHFALEDFKTAAKMQKTNVNLYHVTAECHYRIKEFKEAVDFF
SHALSLDIHFLDAYIGRGNSYMEYGHDKATKQAQKDFIRALHFCPVYLRARICLAYNLQA
QGKFQKAWNHFTIAIDSDPKCYKAYEGRAVVCLQMGDYFAAIQDINIAIKINTTAEFLTN
RGVIHEFMGQQQNAMKDYQAALSLNPTYSLAYFNAGNIYFHHRQFSQARDYFSKALKFDP
ENECAALNRAIANTLLKKYEEAKEDFGHIAEICPFWSAVYFNRAHYYCCLKQFELAEEDY
SKALSLKPNDTLIYNLRAEVRGKLGHISEAMADYNKALDLQDYAIVK
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggactcagttcggaagcacttcggtctgaaacacagggacgaggagtacatcttccga
gagcacgagaagcttcgccgggcatcgaaaaaacactcgctccgcctcaagcaggagctg
gagcgcaggccaaccgtggacagaggcctccggggcccctatgaggtgtcgccggagagc
aaggagaagagcgatgtctgtgatccaccgcagaagccgccgtcggggtcgtcgcgagcg
tcccgcaccagtgtccgctcgctgcggccgcggggcaggcgcccctgggcccggagcccg
caggttgcgcccttccgcctgcgggatttctacatgagcagctcggcgtttctccgctac
cagctgcagccgctgccacccctcatcgcccccgaggccggcacgacgcgggccgtgatg
ctggcggcgccgtccgcgcggcgggacaggtcctggaccgcatcggtggcgcccaagagc
tcgaagtccagcatccttaagcccgcagaggagccgccgctccagcagtcgtcgaagaag
cccgagctgctgccgctgcaggagccccgcctgggtcgcacgaggcacagcagctccgtg
tccagcgtcgacagcgacctgacggccaccctgctgcagcggcgcgtgcgctttcacccc
cacttccggcgccagtcgtccagcgcctcggtggagcccggcggggaagtggccgaggtc
tccccccgggcagaccaggagccccgcgtgcgcctctcgcagaaaccgcagctctcggcc
aggccggcgggctacacgatgcccacgatggtggaagaggtcatagcctcactgcactcg
gaggcccagctggctaccgaccggaccttcaaggagctcatttggagcatcctgggcccc
acctacgacttggccacggatgtagatgtaggtgaacgagacaggggagtactggtgctc
tccggtcagtacgcctttcgtgtcggacgtgaaatgatgctggttccagaagatgaaact
ttgcattactttgaaaacaaccccaatggtttcagtagttttgctgagcctgtgtctgag
gaactttatggagttcattcaagtgatttccagcttgagccagaggatgcaatagaatgg
ggaatgtcagacacagaaagcctgttaaaatctcaggaaactttcgaaattgtgccggta
actgaatcaagcaaacctctggaaagtgaagagcctgcaagtgattcaaaagcagcccag
aggctctctttaaaggaaaaatcattagaattgttgcaaattagaggaaaagaaattaag
catatcagaagagctaaattagaaatttcagaagagaaaagactcaagtctttaaaattc
ctgagacgtaagaaactacgagtaaaaagaattccaggaggacacactcttcctaccctt
catgtgctgtgcaagactttcccagcccaccagctgccacttcatttgagcttggcttct
cgaatataccacacacccagcaggaaaggccacgaaactctggttggacaacttggagac
tctctttttgaaagttgcattggagatgaagaagaaaatgatagattactgcatggaatt
cctaatgtggataatgaagaagaaaatgctgctatcctcacaaggccaccagctcataca
ccacaactacaactcttgggaaaagaaatgtctgcttatccaggatttacaaagtttctt
tggaattcagcttcatccaaattctatgttccagtttctgtcattaaggaaaccgtctat
ccgaaatatgagcatttcatcctaaaaaaggctgcatcatttcataatatccaaaaatat
ttcagtatcaaatctctacaattaaagagagcaaaatctgccattgaattaaggatggag
gagaaggccactgttccatttgaaatcaagaatgacatgcaaagcaatataagagaggta
ttatttcagagagcaaaggaattggagcgctataaaactatacatacagaaagtgataaa
actgtgagaaaaagtatagataccatcctagctcgcatgcaggaaaataccaagtcagga
agtttgtcagtctctctcgttgaagcatctagacaagctggcatttcatacattgtttat
cccaagaaaatgaaaaaaaaagagaaaaatttaagattcggtagacttccatttgtatat
gatgaattagccaagcctccaaaaacacttcaaagatcagtgtctcaagaaattcttcct
ggacagaagaaattcttactcagagttccagtgtatgaacggcaacttcggagtcccagc
ctaccaatggttttaaattttgatgaatttgtcctaaagaagggaggaaatccaaagact
gctggccttcggtcatgggtttttaatttgttctctaaatatacttatcacaaggaaggc
cccaaaattcctaaaatgactactcctaaagaatatactctagtgaaaaagctaccgata
ttggaactgagtgattctttggagtctgatcttgctccagaggtcattaaacattataat
tctgaagtggaaaaattgactgaagaaataaataataagacaacatatcctgcattttcg
tattgtagacgtggagctatttatagaaaactaggaaagttacagagtgccatgcatgat
ctagagaaagctatactcttggaaccattgtttctcaatgcctattggcaccgacatttc
atttatcttttccaagataaatttaatgaagctttggatgacttaaattatataaataag
cataataaatataatgcagaggcatatttgtctaaggcagaaattttcaaagcaagaaat
gatattactttggcaattctaaactatactcaggcaattaaatgcaaacccacagatgct
gatgcttatttcaggaggggtgaattgtatgaaatggaaaacaaaatactggccattgat
gatttttctaagtgtatcttttatgatcccaaaagaactgacgcattaatgaaacgtggg
ttgttttactatgaaaatgaaatgtggcagccagccatacaagattttacagacttgata
aatgtggatccccaaaattctcaagcaaggacgtacagggggagagcatattataaacga
aacttatttagacaagcaactgaagatttttcttttgcaattcacttagatccaaataac
tggttagcaatgtattatagagcctgtttatatagaaagacaaagcctatgagagcacta
caggattatagtgtttcagctctcataaatgatggctatgagaatttaaactgtttccta
catcggggcatactctatgcagaactaaagttttggttgatggcactttgtgattttgaa
tttgttatttctctagacagaaattttgttgcagcttatataaatattggcctcatatat
ttgatgtacctggataattacattgaagctattagaaatttttctgaggctatcaaaatc
gatcctttcaatattcaaagctatatttgtcaagcacaagcctatgataagttgcataaa
ctgaccagatctttaaaagagatttctcgtgctatccaccttcagccagatgaagttcaa
ttatatataataagaggacaatatcttgttaagatgaaatgttatgatcttgcaaagttc
actattcaacaagtaacggaaatgaataaaggtctcgttaacctaagtcctctacagaaa
gcactagtttattcattttgtgacaagtatgacaaggccattcaggtcttggatggaatt
actttgcagaagccagagataactacatataccttattagcaaaaaccctaatgaaggcc
aagagaaataaggaagctttgaaaatgtttaaaaaggcactgggggtgttttcacattcc
actaaaggaccagatgccactgaagcttcagcagactgtctgtatcacttgggtctttgt
tatgtggatgaaggcaattcacaaatggcttatgattgttttacaaaagctgtgaaagca
aaacctgattttgctgaaggcttttatcaacgtgggctttgtaaagtgaaacttggcaag
aattacccaatcctggattttaatcgtgcaattaccctggattcaaatcattaccaggca
tatttaagtcgagcagcctactatggtttgaaaggcagatattccaaagcaatcttaaat
tgtaatgaggccattaaaatttgttctcagaatgtgtttgcctatatctacagaggagtt
ctgaaatactacaataagacttataaattagctattatagatttaaccatagctgtcagc
atggacaaaaatagttatatagcgttttacaacagagctatttgttatacccgggtcagt
gaatatacaaaggccttaatagattatggaacggtgcttcttcttgattctggagagacc
atagtcttgaatactttcattaatcgtggacgtatctatacagaactagagcaataccat
tttgctttagaggattttaaaactgctgcaaagatgcaaaagaccaatgtaaacttgtat
catgtgactgccgagtgccattacagaattaaagagttcaaagaagctgtcgatttcttc
agtcatgctcttagcttggatatacattttctggatgcttacattggacggggaaattcc
tacatggaatatggtcatgacaaagccaccaaacaagcccagaaggattttattcgagca
ttgcatttttgcccagtgtatttaagagctagaatttgtcttgcctataatttacaggcc
caaggaaaattccagaaagcttggaaccactttactattgccatagacagtgatccaaag
tgctacaaagcctatgaaggtagagctgtggtctgtcttcagatgggtgattactttgct
gcaattcaggatattaacattgccataaagatcaatactacagcagaattcttaacaaat
cgtggtgtgattcatgagtttatgggtcaacaacagaatgcaatgaaagactatcaagct
gcactttctctaaaccccacatactcgctggcttactttaatgcaggaaatatctacttt
caccacaggcagttttcccaggcccgtgattacttctcaaaggctttaaagtttgatcca
gaaaatgaatgtgctgccttgaatcgagccattgcaaacacattgctaaagaaatatgaa
gaagcaaaagaagattttggacatatagctgaaatctgtcccttttggtctgcagtgtat
tttaatagagcacattactactgttgtttaaaacaatttgaactagcagaagaagactac
agtaaagcgctgtctttgaagccaaatgacactctaatatataatcttagagcagaagtt
cgaggtaaattaggtcatattagtgaagctatggctgactacaacaaagcacttgatctt
caagattatgctatagttaagtga
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integrated database retrieval system
