Sorex fumeus (smoky shrew): 130041763
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Entry
130041763 CDS
T10594
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130041763 (NPAS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130041763
NCBI-ProteinID:
XP_055989971
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Position
Unknown
AA seq
992 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGAAAGVPAGAGMGRAGTAANGTPQNVQGITSYQQRITAQHPL
PNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAI
TSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGIQMWKSELCMRKTPC
EVIGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQV
ELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVES
TSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQ
IMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCY
HFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNII
WVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDTSGITEDNENSKSDEKG
NQSENSEDPEPDRKKSGNACDDDMNCHDDGHSSSNPDSRDSDDSFEHSDFEHPKAGEDGF
GALGPMQIKVERYVESESDARLQACESLTSDSAKDSDSAGEAGAQAPGKHPKRKRRRKRQ
KGGSASRRRLSSASSPGGLDPAGLAEPPRLLASPHSASVLKIKTEISEPINFDNDSSIWN
YPPNREISRNESPYSMTKPPSSEHFPSPQGGASGGSGLHVAIPDSVLTPPGTDGAAAAAA
AAAARKTQFSTSATPALAPVASDPLSPPLSASPRDKHPGGGGGAAGASGVGTSSNGPSTS
NSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAASSTAAQRVYTTGTIRYAPAEVTLAMQ
GNLLPNAHAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVSAASLTQMPAGN
VFTTAEGLFSTLPFPVYSNGIHAAQALERKED
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaatctttccggatttcagcgtgcaggtgacggccgcggcggccggcggggcg
gccgcgggggtgccggccggagcgggcatggggagggccggcaccgcggccaacggcacc
ccgcagaacgtccagggcatcacctcctaccagcagcgaataactgcccagcatcctctg
cccaaccaatcagaatgtaggaaaatctacagatatgacggaatctactgtgaatctacc
taccagaacttgcaagcactgagaaaagagaaatcccgagatgctgcacgctctcgtcgg
ggaaaggaaaattttgagttctatgaattggccaaattgttgcctcttcctgcagccatc
actagccagcttgacaaggcatccatcattcgacttacaattagttatctgaaaatgaga
gactttgctaaccaaggggaccctccgtggaacttgcgaatggaaggccctccacctaac
acatcagtaaaagggatacaaatgtggaaatctgaactctgcatgagaaagacaccatgt
gaagttataggtgcacaacgaaggagaagccccagtgcactggccattgaagtattcgaa
gcacatttgggaagtcacattttgcagtccctggatggctttgtatttgcactaaatcaa
gaaggaaaatttttgtatatttctgaaacagtctccatctacctaggcctctcacaagtg
gagctgacaggcagcagtgtctttgactacgtgcaccctggggaccacgtggagatggca
gaacagctgggcatgaagctcccacccgggcggggcctcctctcccagggcacagctgag
gatggcgccagctccgcgtcttcctcctcacagtcggagaccccagagccagtggagtca
accagccccagtctgctaaccactgacaacacccttgagcgttcctttttcatccgaatg
aaatcaactttgaccaaacgtggcgtgcacatcaaatcatcaggatataaggtgattcac
atcacaggccgactacgactgagggtgtccttatcccatgggaggaccgtccccagccaa
atcatgggtctcgtggtggtggcccatgccctgcctccccccaccatcaatgaagtcaga
atcgactgccacatgttcgtcacgcgagtaaacatggacctcaatatcatttactgtgaa
aataggattagtgattatatggatctgactcctgtagacatcgtagggaagagatgctac
cacttcattcacgcggaagatgtcgagggcatccggcacagtcacttggacttactgaat
aagggccagtgtgtgacgaagtactatcgttggatgcagaagaatggaggctatatttgg
atacagtctagtgccaccatagctattaatgccaagaacgcaaatgagaagaacatcatc
tgggtgaactatcttcttagtaaccccgagtacaaggacaccccaatggatatcgcacag
ctcccccatctgccggagaaaacgtcagagtcctcagagacatctgactcggagtcagac
tctaaagacacctcaggtattacagaggacaatgagaactccaaatcggatgagaaggga
aaccagtcggagaacagcgaggaccccgagcccgaccggaagaagtccggcaacgcgtgc
gacgacgacatgaactgccacgacgatggccacagctccagcaacccggacagccgcgac
agcgacgacagcttcgagcactcggacttcgagcaccccaaggcgggcgaggacggcttc
ggcgcgctgggccccatgcagatcaaggtggagcgctacgtggagagcgagtcggacgcg
cggctgcaggcctgcgagtcgctcacgtcggacagcgccaaggactcggacagcgcgggc
gaggcgggcgcgcaggcccccggcaagcaccccaagcgcaaacggcggcggaaacggcag
aagggcggcagcgccagccgccggcgtctgtccagcgcgtccagccccgggggcctggac
cccgcgggcctggccgagccgccgcggctgctggcctccccccacagtgcctcggtgctc
aagatcaagacggagatctcggaacccatcaactttgacaacgacagcagcatctggaac
tacccccccaaccgggagatctccaggaatgagtctccgtacagcatgaccaagcccccc
agctcggagcacttcccgtccccgcaggggggcgcgagcggcggctcggggctgcacgtg
gccatcccggactcggtcctcacgccgcccgggaccgacggcgccgccgccgctgccgcc
gccgccgccgcccgcaagactcagttcagcacgtcggccaccccggccttggctccggtg
gcctccgaccccctctcgcccccgctctcggcgtccccgcgggacaagcaccccgggggc
ggcgggggagcggcaggggccagcggggtgggcacgagcagcaacggccccagcacgtcc
aactccttgctgtacacgggggacctggaggcgctgcagaggttgcaggcgggcaacgtc
gtgctccccctagtgcacagggtgaccgggaccttggccgccagcagcacggccgcgcag
agggtctacaccacgggcaccatccgctacgcgcccgccgaggtgaccctggccatgcag
ggcaacctgctgcccaacgcgcacgctgttaacttcgtggacgttaacagccccggcttc
ggcctcgaccccaagacgcccatggagatgctctaccaccacgtgcaccggctcaacatg
tcaggacccttcggcggcgcggtgagcgcggccagcctgacgcagatgccggcgggcaac
gtgttcaccacggccgagggactcttctccacgctgcccttccccgtctacagcaacggc
atccacgcggcgcaggctctggagcgcaaggaggactga
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