Sorex fumeus (smoky shrew): 130041805
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Entry
130041805 CDS
T10594
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03410
Base excision repair
Brite
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
130041805 (APEX1)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
130041805 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130041805
NCBI-ProteinID:
XP_055990044
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Position
Unknown
AA seq
318 aa
AA seq
DB search
MPKRGKKGAVAEDGDEPKTEPEAKKSKAGAKKNEKEAAGEGPALYEDPPDQKTSPSGKSA
SVKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPELSHQYWA
APTDKEGYSGVGLLCRQCPIKVSYGIGEEEHDQEGRVIVAEFEAFVLVTAYVPNAGRGLV
RLEYRQRWDEAFRKFLKGLASHKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQEREGF
GELLQAVPLADSFRHLYPDKAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKI
RSKAMGSDHCPITLYLAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgagggaaaaagggagcggtggcagaagatggagacgaacccaagactgag
ccagaggccaagaagagtaaggcgggagcaaagaaaaatgaaaaagaggcagcaggagaa
ggaccagccctttatgaggacccgccagatcagaaaacctcacccagtggcaaatcagcc
tcggtcaagatctgctcctggaatgtggatgggcttcgagcctggattaagaagaagggt
ttagattgggtcaaggaagaagcacccgatattctgtgcctccaagaaaccaaatgttca
gagaacaaactaccagctgaacttcaggagctacctgaactatcacatcagtactgggca
gccccaacagacaaggaagggtacagtggcgtgggcctactctgtcgccagtgcccaatc
aaagtctcttatggcattggtgaggaagaacatgatcaggagggccgagtgatcgtggct
gaatttgaggcgtttgtgctggtaaccgcctatgtaccgaatgcaggccgtggtctggtg
cgcctagagtaccgacagcgctgggatgaagcttttcgcaagttcctgaaaggcttggct
tcccacaagccccttgtgctatgtggggacctcaatgtggctcacgaagaaattgacctt
cgcaaccccaaaggaaacaaaaagaatgctggcttcacaccccaagaacgtgaaggcttt
ggagagctcctgcaggcggtgcctctggctgacagcttccgtcacctctaccctgacaag
gcttatgcttacaccttttggacttacatgatgaatgctcggtccaaaaacgttggttgg
cgtcttgactacttcctgttgtctcattctttgttacctgccttgtgtgacagcaagatt
cgttccaaggctatgggcagtgaccactgccctattaccctctacctagcactgtga
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