Sorex fumeus (smoky shrew): 130041846
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Entry
130041846 CDS
T10594
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Spliceosome [BR:
sfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130041846 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
130041846
NCBI-ProteinID:
XP_055990091
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MQNSHMDENRNSSNGSTDNSLEVVVEQSADFSTEIMNVTEMEQSPDGSPNENAAIEESEM
ANAVELPVTETQANFPAEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDSGDP
ETNNTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVILFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNAKSNNESSFYAIKLARHLFKIQKNFPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
RQNEENIINCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKVHTEDTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQY
YPPPPT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattctcacatggatgaaaacagaaattctagtaatggcagcacggacaacagt
ttggaggtagtggtggaacagtctgctgacttcagtactgagattatgaatgttacagaa
atggaacagtcgcctgatggttctcccaatgaaaatgcagctatagaagaaagtgaaatg
gcaaatgctgtggaacttccagtgacagaaacacaagcaaatttccctgcagaatatgaa
aaattttggaaaactgtagaaaataatcctcaggattttacaggctgggtatatttgctt
cagtatgtagaacaggagaatcacttgatggctgccaggaaagcatttgacaaatttttc
atacactatccatattgctatggttactggaaaaagtatgcagatcttgaaaagcggcat
gacaacattaaacaatcagatgaggtgtatcggcggggacttcaggcaatacctcttagt
gttgacctttggatacattatataaacttcttaaaagaaactctggactctggtgatcct
gagacaaataatacaataagaggaacttttgagcacgctgttctagctgcaggaacagat
ttccgatccgacagactatgggaaatgtatataaactgggaaaatgaacagggaaacctg
agagaagttacagctatatatgatcgcatccttggtattccaacacagctgtatagtcat
cattttcagagatttaaagaacatgtacagaataacttgcctagagatcttttaactggt
gagcaatttattcagttacgaagggaattagcttctgtcaatggacatagtggtgatgat
ggtcctcctggtgatgatctgccatcggggattgaagatataactgatccagcaaagcta
ataacggagatagaaaacatgagacatagaatcattgaaattcatcaggaaatgtttaat
tataatgaacatgaagttagtaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaaaccacttgaaaaggcacaactaaaaaactggaaagaatacttagaattt
gaaattgaaaatggaactcatgaacgagtagtgattctctttgaaagatgtgtcatatca
tgtgctctctatgaggagttttggattaagtatgccaagtacatggaaaatcatagcatt
gaaggagtgaggcatgtcttcagcagagcttgtactattcatctcccaaagaaacccatg
gtgcatatgctttgggcagcttttgaggagcagcagggtaatattaatgaggccagaaat
atcctgagaacatttgaagaatgtgttctaggattggcaatggttcgtttgagaagagta
agtttagaacgacggcatggaaatatggaggaagctgaacatttgcttcaggatgccatt
aagaatgccaaatcaaataatgagtcatcattttatgctatcaaactagctcgccatctt
tttaaaatacaaaagaactttccaaaatcaagaaaggtgcttttggaagcaattgaaaga
gacaaagagaacacaaagttatacctcaatttactggaaatggaatatagtggtgacctc
agacaaaatgaagaaaacatcattaattgttttgacaaagctatacatgggtcattacct
attaaaatgagaattacattttctcaaagaaaagtggaatttcttgaagattttggttca
gatgttaataagcttctgaatgcttatgatgaacaccaaacacttctcaaagaacaggat
tctttaaaaagaaaagcagaaaatggctcagaagaaccagaggaaaagaaagtacacaca
gaagatacttcatcatctacacagatgattgatggtgatttacaggcaaatcaagctgca
tataattatagtgcctggtaccaatacaattaccagaacccttggaattatggacagtat
tatcccccccctccaacctga
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