Sorex fumeus (smoky shrew): 130041875
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Entry
130041875 CDS
T10594
Symbol
EXD1
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130041875 (EXD1)
BRITE hierarchy
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Ortholog
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Other DBs
NCBI-GeneID:
130041875
NCBI-ProteinID:
XP_055990133
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Position
Unknown
AA seq
569 aa
AA seq
DB search
MDPSSDYHFLNQILWRRVKLTLVCGIFEGVLQHVDPNRIIVLKKVKNVETGRSVPGVKMF
FGHEIVNVELLDEEEQVREKASSVSLKTEKTRIEKVKNDQNVCQSASPAPEKPITSLLND
LKYSPSEEEEVTYTVIDQFQQKFGAAMLHIKKQSVLSVAAEGASVCRHGKLCWLQVATNS
RVYLFDIFLLGSRAFNNGLQMVLEDKRILKVIHDCRWLSDCLSHQYGILLNNVFDTQVAD
VLQFSMETGGFLPNCISTLQESLIRHLKVAPKYLSFLEERQNLIQENPEVWFTRPLSPSL
LKILALEATYLLPLRLVLLDAMMSDLTTLVDGYLNTYREGPAERLGVTEPTCMELPEELL
QLKDFQKQRRERAAQEYEVDAQGLLIRTVLHPKKAVTETLGKEERVRGFLLCKNSLLDKA
PSFTSPEDVEDVGLLTGASKSKLPPAEPQPPPPLKGDSREEASNKLTPPESEGLEDPSLP
QEEYLKISKHEFQTNLSLKQEIEQLLMAENKENVKCTKQDVSRTFPLPPEIRGSPKDTFP
PFREALLSTLPPCPALEKTDSWMPPPNLP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagtagtgactaccatttcctcaaccagattttatggagaagggtgaaactt
acattggtttgcggcatctttgaaggggtgctccagcatgtggaccctaacaggatcatt
gtcctgaaaaaagtgaagaatgtggagactggtcgaagtgtcccaggagtgaagatgttt
tttgggcatgagattgtaaatgtggagttactagatgaagaggaacaagtgagagaaaag
gcatcttctgtcagtttaaagacagaaaaaaccaggatcgagaaagtgaaaaatgaccaa
aatgtttgtcagtctgcttctcctgccccagagaaacctatcacatctctactgaatgat
cttaaatatagtccatctgaggaagaagaggtaacctacacagtcatcgatcagttccaa
caaaagtttggtgccgcaatgctccacattaagaagcagagtgtcctgagcgtggcagct
gaaggagccagtgtgtgtcggcatgggaaactctgttggcttcaggtggccaccaatagc
cgggtttacttatttgacattttccttttgggaagtcgtgctttcaacaatggacttcag
atggtattagaagataaaagaattctaaaggttatacatgactgccgttggctttccgat
tgcctctctcatcagtatggaattttgctgaataatgtttttgacacacaggtcgcagat
gtccttcaattttccatggaaacaggtggctttctcccaaattgcatcagtaccttgcag
gagagcttaatcagacaccttaaagtagcccctaaatatctctccttcctggaagaaaga
caaaatctgattcaggaaaatcctgaggtgtggttcacacgacctctttcaccttcattg
ctgaaaattttggccctggaagctacctacctgcttccccttcgcctggtgctcctggat
gcaatgatgtccgacctgaccaccctggtggacggctacctgaacacctaccgcgaaggc
cccgccgaacgcctcggggtcacagagcctacatgtatggagcttccagaggaattactt
cagctcaaggacttccagaagcagcgcagagagagagctgcccaagaatatgaggtggat
gcacaaggactcttaataaggactgtgctacacccaaagaaagcagtgacagagaccttg
gggaaagaggaaagagtgaggggcttcttgctctgtaaaaactccttgttagacaaagct
ccaagttttacgtctcccgaggatgtcgaggatgtcggtttgctgacaggagcatctaag
agtaagctgcctccagcagagccgcagccgccacctcccctaaagggagactccagggag
gaggccagtaataaactcactcctcctgagtctgaggggctggaggatccaagtctgccc
caagaagaatacctaaagatatccaagcatgaatttcagacaaatttatctttaaaacag
gagatagaacagttactgatggcagaaaacaaagaaaatgtaaaatgcaccaagcaagat
gtgtccaggacttttccccttcctccggaaattagagggtctccaaaggacaccttccct
cctttcagagaagctttgctttccacacttcctccctgtccggccctggagaagacagat
tcctggatgcctcctccaaatcttccctag
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