Sorex fumeus (smoky shrew): 130041942
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Entry
130041942 CDS
T10594
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
130041942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130041942
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
130041942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
130041942
NCBI-ProteinID:
XP_055990208
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNMGH
TRSSNYSLPGLTASQPSHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgctgccgtcgttcggctttacgcaggagcaagtggcgtgcgtgtgcgaggtt
ctgcagcagggcgggaacctggaacgcctgggcaggttcctgtggtcgctccccgcctgt
gaccacctgcacaagaacgaaagcgtgctcaaggcgaaggctgtggtcgccttccaccgt
ggcaacttccgcgagctctacaagatcctagagagccaccagttctcgccgcacaaccac
ccgaagctgcagcaactgtggctgaaggcgcactacgtggaggccgagaagctgcgcggc
cgacccctgggcgccgtgggcaaatatcgggtgcgccgaaaattcccgctgccgcgcacg
atctgggacggcgaggagaccagctactgcttcaaggagaagtcgcggggcgtgctgcgg
gagtggtacgcgcacaacccctacccatcgccgcgggagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccgg
gccgccgaggccaaggaaagggagaacaccgaaaacaataactcctcctccaacaagcag
aatcaactctctcctctggaagggggcaagccgctcatgtccagctctgaagaagaattc
tcacctccccaaagtccagaccagaactcggttcttctgctgcagggcaatatgggccac
accaggagctcaaactattctctccccgggttaacagcctcgcagcccagccatggccta
caagcccaccagcatcagctccaggactccctgctcggccccctcacctccagtttggtg
gacttggggtcctaa
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