Sorex fumeus (smoky shrew): 130042003
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Entry
130042003 CDS
T10594
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03050
Proteasome
sfum05010
Alzheimer disease
sfum05012
Parkinson disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05017
Spinocerebellar ataxia
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05165
Human papillomavirus infection
sfum05169
Epstein-Barr virus infection
sfum05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130042003 (PSMC1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
130042003 (PSMC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
130042003 (PSMC1)
05165 Human papillomavirus infection
130042003 (PSMC1)
09164 Neurodegenerative disease
05010 Alzheimer disease
130042003 (PSMC1)
05012 Parkinson disease
130042003 (PSMC1)
05014 Amyotrophic lateral sclerosis
130042003 (PSMC1)
05016 Huntington disease
130042003 (PSMC1)
05017 Spinocerebellar ataxia
130042003 (PSMC1)
05020 Prion disease
130042003 (PSMC1)
05022 Pathways of neurodegeneration - multiple diseases
130042003 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sfum03051
]
130042003 (PSMC1)
Proteasome [BR:
sfum03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
130042003 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_25
AAA_14
AAA_3
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_7
AAA_24
Parvo_NS1
NB-ARC
PhoH
NACHT
ABC_tran
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
130042003
NCBI-ProteinID:
XP_055990316
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagccaaagtgggggacatggtcctggaggtggcaagaaggatgacaaggac
aagaagaagaagtacgagcctcctgtaccaactcgagtggggaaaaagaagaagaaaaca
aagggaccagatgctgccagcaaactgccactggtgacccctcacacccagtgccggtta
aagttactgaagttggagagaatcaaagactaccttctcatggaggaagagttcattcga
aatcaggaacaaatgaaacctctagaagagaaacaggaggaggagagatccaaggtggat
gatctgagggggaccccaatgtccgtggggaccttggaggagatcatagacgacaaccac
gccatcgtgtccacatctgtgggctcggaacactacgtcagcattctctccttcgtggac
aaggacctgctggagcccggctgctccgtcctgctcaaccacaaggtgcatgccgtgatc
ggggtgctgatggatgacacggaccccctggtcaccgtgatgaaggtggagaaggcaccc
caggagacctatgccgatattgggggcttggacaaccagatccaggaaattaaggaatct
gtggagcttccactcacgcaccccgagtactatgaagagatgggcatcaagccccctaag
ggggtgattctctatggcccacccggcacaggtaaaaccttactagccaaagcggtagca
aaccagacgtcggccactttcctgcgagtggttggctcagagctgatccagaagtacctg
ggggatgggcccaagctcgtgcgggagctgttccgcgtcgccgaagagcatgcgccatcc
atcgtgttcattgacgagattgatgccatcgggacaaaaagatacgactccaactctgga
ggggagcgagaaatccagagaaccatgttggagctgctgaaccagctggacgggtttgac
tcgcggggagacgtgaaagtcatcatggccaccaaccggatagagactctggacccggcg
ctcatcaggccaggccgcattgacaggaagattgagttccccctgcctgacgagaagacc
aagaagcgcatcttccagatccacacgagcaggatgacgctggctgacgacgtcaccctg
gatgacctgatcatggccaaagatgacctctcgggggccgacatcaaggcaatctgtaca
gaagctggtctgatggccttgagggaacggaggatgaaagtgacaaatgaagatttcaaa
aagtcgaaagaaaatgttctttataaaaagcaggaaggcaccccagaggggctgtatctc
tag
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integrated database retrieval system
