Sorex fumeus (smoky shrew): 130042016
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Entry
130042016 CDS
T10594
Symbol
TBPL2
Name
(RefSeq) TATA box-binding protein-like 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03022
Basal transcription factors
sfum05016
Huntington disease
sfum05017
Spinocerebellar ataxia
sfum05165
Human papillomavirus infection
sfum05166
Human T-cell leukemia virus 1 infection
sfum05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130042016 (TBPL2)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
130042016 (TBPL2)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
130042016 (TBPL2)
05165 Human papillomavirus infection
130042016 (TBPL2)
09164 Neurodegenerative disease
05016 Huntington disease
130042016 (TBPL2)
05017 Spinocerebellar ataxia
130042016 (TBPL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130042016 (TBPL2)
03021 Transcription machinery [BR:
sfum03021
]
130042016 (TBPL2)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
130042016 (TBPL2)
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130042016 (TBPL2)
RNA polymerase III system
TFIIIB
130042016 (TBPL2)
RNA polymerase I system
SL1/TIF-1B
130042016 (TBPL2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
130042016
NCBI-ProteinID:
XP_055990330
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MEGEDETYLELYLDQCASQDDLTPAGPPLLHPLVPCDVHIPHPSNPETAFNSHLEVQEAS
GDFSAMDLSFLPDELTQKNRDQNDIRSKHEAEESDKIYSQPKGSLLPDQLPVGLGLTSSN
VPDSQCHENPGDADSVPLSPDKPSFLPLTSITPMTPMNAVSECSGMVPQLQNIVSTVNLA
CMLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFGSGKMVCTGAKSEEESRLAAR
KYARVVQKLGFPARFVDFKIQNMVASCDMRFSIRLEGLVLTHRQFSSYEPELFPGLIYRM
VKPRIVLLIFVSGKIVLTGAKERSDIYEAFENIYPILKCFKKS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaggatgagacgtacctggagctctacctggaccagtgcgccagccaggat
gacctcacccctgctgggccacccctgctccatccacttgtgccatgtgatgttcacata
cctcacccatccaatccagagactgcatttaattcacatcttgaagtccaagaggcatct
ggcgatttctcagctatggatcttagcttcctcccagatgaacttacccaaaaaaataga
gaccagaatgacattagaagcaagcatgaagctgaagaaagtgacaaaatttacagtcag
ccaaagggatcactattacctgaccagcttcctgttggcttgggcttaaccagcagcaat
gtaccagattcccagtgccatgaaaatccaggtgatgcagattcagttcctctgtctccc
gataaaccaagcttcttgcctctgacatccataactcccatgacacctatgaatgctgtt
tcagaatgctctggaatggtgcctcaattgcagaatatagtttccactgtaaacctagcc
tgcatgttggatctgaagaaaatagccttgcatgcaaaaaatgcagaatataacccaaag
cggtttgctgctgtcataatgaggatccgagagcccaggacaacagcccttatatttggt
tctgggaaaatggtctgcacaggagccaaaagtgaagaggagtctcgactcgcagcgagg
aagtacgcccgcgtagtgcagaagctcggcttccctgccagattcgtggattttaaaatt
cagaacatggttgcgagctgtgatatgagattctccatcaggctggaaggcttggtgtta
actcatcggcagtttagtagttatgaaccagaactgtttcctggtcttatttatagaatg
gtaaaaccacgaattgtactgcttatctttgtatctggaaaaattgtgctgacaggtgcc
aaagaacgttctgacatctatgaagcatttgaaaacatctatcctattctaaaatgtttt
aagaagtcctga
DBGET
integrated database retrieval system