Sorex fumeus (smoky shrew): 130042023
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Entry
130042023 CDS
T10594
Symbol
DCAF5
Name
(RefSeq) DDB1- and CUL4-associated factor 5 isoform X1
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130042023 (DCAF5)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130042023 (DCAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
130042023
NCBI-ProteinID:
XP_055990334
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MKRRAAGLGGSMRSVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAI
EFSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAFNSGNTKVFSG
GNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE
PFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSV
RFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGS
DDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKI
WSPYKQPGCTGDLDGRIEDDSRCLYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMMAFF
DSLVRREIEGWSSDSDSDLSESTILQLHAGVSERSGYTDSESSASLPRSPPPAVDEPGDS
AFHLGPLRVPGASASTGAGAGATANAASAAAPATNAAPSPPPPPACEDATARQQRLSALR
RYQDKRLLALSNESDSEENACEVELDTDLFPRPRSPSPEEESSSSSSASSSEDEEELNER
RASTRQRNALRRRQKAPREERPSAPAKPADPYVGEDNYDYPQIKVDDLSSSPTSSPERGA
SALDVQPSRASPTSDIESVERKIYKAYKWLRYSYISYSNSKDGESSLTAAEADEGRAGTS
RKDSPAPSSSQEARAHPAPAPRSQDQPPEGCAKEAFREGTCARNASGGPGPELGGSHPRA
EAPEDAAPDPNNGGSVEHAFETKKLNGKALSKALSGRAEETPSPPAPKTSGSAVGSGAGS
CPRTQPHDSEERSLETICANHNNGRLHPRPPHLPSNGQNFGEQEAAACSSAGHSDTDHDN
LSMAGPLLHKDCCGSEMACEAPSAGTREDPPEPPDTDSNRAGHGHSGHKRHRVELEDTDS
ENSSSEKKLKT
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagagctgctggcctggggggcagcatgaggtcagtggtgggcttcttgtcc
cagcggggcttgcatggggaccccctgctcactcaggactttcagaggagacgcctgcgg
ggctgcagaaacctctacaagaaggacctcctcggccacttcggctgtgtcaatgccatt
gaattctccaacaatggaggccagtggctggtctcaggaggagacgatcgccgggttctg
ctatggcacatggaacaagcgattcattccagagtcaagcccatacaactaaagggagag
caccattctaacatattttgcctggctttcaacagtgggaacaccaaagtgttctctgga
ggaaatgatgaacaagttattctccatgatgttgaaagcagcgagaccttggacgtgttt
gctcatgaagatgcagtgtatggcttgtcagtgagcccagtaaatgacaatatttttgcc
agctcgtcagatgatggccgagttctcatctgggacatccgagagtctccccatggagag
cccttctgcctggcaaactacccatcagctttccacagtgtcatgtttaatccagtggag
cccaggttattagccacggccaattcgaaggaaggagtgggactctgggatattcgaaaa
cctcagagttctctcctgcggtatggtggcaacttatccctccaaagtgccatgagcgtg
cgattcaacagcaatgggactcagctcctggcccttaggcgtcgcttgccccctgtgctc
tatgacattcactcccgcctgcctgtgttccagtttgacaatcagggttacttcaactct
tgcaccatgaaaagttgctgtttcgcaggagatcgtgaccagtatatcctttcaggctct
gatgacttcaacctctacatgtggagaattcctgcagatccagaagcaggtggcattggt
agggtggtcaacggagccttcatggtgctgaaagggcatcggtctattgttaaccaggtt
cgatttaatccccatacctacatgatctgctcttctggtgtagagaagattatcaagatc
tggagcccgtacaagcagccaggatgcactggagacctggatggccggattgaggatgat
tcccgttgcctgtacacccacgaggagtacatcagcctggtgctcaacagcgggagcggc
ctgtcgcacgactacgccaaccagtctgtgcaggaagacccccggatgatggccttcttc
gactcgctggtgcgccgggagatcgagggctggagctccgactcggacagcgacctcagc
gagagcaccatcctgcagctgcacgccggtgtcagcgagcgctcgggctacaccgactcg
gagtcctcggcctcgctgccccgctcgccgccgcccgccgtggacgagcctggcgacagc
gccttccacctggggcccctgcgtgtgcccggtgccagcgccagcacaggcgcaggcgct
ggcgccactgccaacgccgcctccgctgccgcccccgccaccaacgccgcaccctcgccc
ccgcccccgccggcctgcgaagacgccaccgcgcgccagcagcgcctgtccgccctgcgg
cgctaccaggacaagcgcctgctggcgctctccaacgagtccgactcggaggagaacgcc
tgcgaggtggagctggacactgacctcttcccccggcctcgctcgcccagcccggaggag
gagtccagcagctcgagcagcgccagcagctccgaggacgaggaggagctcaacgagcgg
cgcgcgtccacccggcagcggaacgcgctgcggcgccgccagaaggcgccccgggaggag
cggcccagcgcccccgccaagcccgccgacccctacgtcggggaggacaactacgactac
ccccagatcaaagtggacgacctctcctcctctcccacctcctcccccgagcgaggcgct
tcggcgctggacgtgcagcccagccgggcgtcgcccacctccgacatcgagtcggtggag
cggaagatctacaaagcctacaagtggctgcgctactcctacatctcctactccaacagc
aaggacggcgagagctcgctgacggcggccgaggcggacgagggccgagcggggaccagc
cgcaaggacagcccggcgccctcctccagccaggaggcccgcgcccacccggccccggcg
ccccgcagccaggaccagccgcccgaaggctgcgccaaggaggcctttcgggaggggacc
tgtgccaggaacgccagcggtggccccggccccgagctcggcggcagccacccgcgggcg
gaggctcccgaggacgccgccccggaccccaacaacggtgggtctgtagaacacgctttt
gaaaccaagaagctcaatggaaaggccctgagcaaggccctgagcggccgcgccgaggaa
acgccctctccccctgctcccaagacgtctggctccgctgtgggcagcggggctggcagc
tgtcccaggacgcagccccatgacagcgaggagaggagcctcgagaccatctgtgccaac
cacaacaatgggcgcttgcacccccgcccccctcacctccccagcaacgggcagaacttc
ggggagcaggaggcggcggcctgctcttccgcgggacattcggatactgaccatgataac
ttgtccatggcggggcccctcttgcacaaggattgctgtgggtctgaaatggcctgtgag
gcccccagtgctggaacgagagaggaccccccggagcccccagacacggacagcaacaga
gccgggcatggtcatagtggccacaaaaggcaccgagttgaattggaagatacagattct
gagaattcttcttcagagaagaaattaaaaacatga
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