Sorex fumeus (smoky shrew): 130042061
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Entry
130042061 CDS
T10594
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03013
Nucleocytoplasmic transport
sfum03015
mRNA surveillance pathway
sfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130042061 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
130042061 (ACIN1)
03015 mRNA surveillance pathway
130042061 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130042061 (ACIN1)
03041 Spliceosome [BR:
sfum03041
]
130042061 (ACIN1)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130042061 (ACIN1)
Spliceosome [BR:
sfum03041
]
Complex C
Other components
EJC/TREX
130042061 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
130042061
NCBI-ProteinID:
XP_055990391
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPH
AAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAEHEDASAESEDEMIHPEG
VASLLPPDFQSSLELSRHSPRKSSISEEKGESDDEKRRKGERRSTRVRQARAAKLSECSQ
AAEEEEDQETPSRNLRVRADRNIKTEEDEEEEEEEEEEEEEEEDDDEGQKSRDAPVLKQF
KVESGGEMPGAKPEEVMDEKPQTVRSPEQELLERGGRVTRSQDEARRSYLARHPPEKEMQ
TASPPEEEGKETKPSKDLEGKPKSPSPPRLTEDVEKALLVLPPEHTAGEEEAPPPLLTKE
ATSPPKTQLQSEEAEPMEGPAPPVLTQLSPPNADAEVREVLLSQHSVQVVGSLPPLSSPA
DTKAESLVKEMPESALPAVQASTLAESTQKITETESEKSAQSLSLNIEELAPTKGVTEES
LKQPSLEQKEGLRASPALLPSHGLKRSADSSSSRSSSSSSSSSRSRSRSPDSSGSRSHSP
PRSQQRDVSQPHILTNPHGRSTMGSRSTSESRSRSRSRSRSASSNSRKSLSPGVSRDSST
SYTETKDLSSGQEVVTPPVPQVQVHEPKERTSTPSSLRGRRLSQPEPEEKRVLQRLQPER
GSPKKCEAEEAEPPAATQPQTSEIQTTHLPESERTHHTVEEKEEVTMDTSENRPESEVPE
PPVTIGDQVSNDDRPEGSAEDEEKKESALPKSFKRKISVVSATKGVPAGNSDTEGGQPGR
KRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNGD
DGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPAPPQVSVEVALPPPVEHE
VKKVTLGDTLTRRSISQQKSGVSITIDDPVRIAQVPSPPRGKISNIVHISNLVRPFTLGQ
LKELLGRTGTLVEEAFWIDKIKSHCFVTYATVEEAVATRTALHGVKWPQSNPKFLCADYA
EQDELDYHRGLLVDRPSEAKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERAVREQWA
EREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPP
AKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEA
ERERNRQLEREKRREHSRERDRERDRDRERDRGDRDRDRERDRERGRERDRRDTKRHSRS
RSRSTPVRDRGGRR
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgacc
gacctgaaggccgcgctggagcagcgaggcctagccaagagcgggcagaagagtgccctg
gtcaagcggctcaaaggggccctaatgctagaaaatttacagaaacattcaacaccccat
gctgcattccagccaaattcccagattggcgaggaaatgagccagaacagtttcataaag
cagtatctggaaaagcagcaggagctacttaggcagcgtttggaacgtgaagctcgtgaa
gctgctgaacatgaagacgcttcagcagagtctgaggacgagatgatccatcccgaggga
gtggcttccctgctgcctcctgactttcagagcagcctggagctcagcagacattcaccc
agaaaaagctctatttctgaagaaaagggtgaatctgatgatgagaaacgaaggaaagga
gagcgacgctcaactagggtcagacaggcaagagcagctaaactctctgaatgcagtcag
gctgctgaagaggaggaagatcaggaaacaccttccagaaatctgagggtcagagcagat
cgaaatataaaaactgaggaggacgaagaggaggaagaggaagaggaagaagaggaggaa
gaggaggaagatgatgatgagggacaaaagtctagggatgcacctgtcctaaaacagttt
aaagtagaatcagggggagaaatgcccggagcaaaaccagaagaagtgatggacgagaaa
ccccaaactgtaagatccccggagcaggaactattagagcgaggaggtagggtgacaagg
tcccaggacgaggcaagaagaagttatctggctagacatccgccagagaaagagatgcag
acagcttctccccctgaggaagaaggaaaggaaactaaaccttcaaaagacttagaggga
aaacccaagtctccttctccccctcgattgacagaagatgtggagaaggcccttctggtg
ctgccgccggagcatactgctggtgaggaggaggcgcccccacctttacttaccaaggaa
gctacttctccaccaaaaacacaactgcagagtgaagaagcagagcccatggaaggccca
gccccccctgttctcactcagttgtcgcctcctaatgcagatgctgaggttagggaggta
ttactatctcagcactctgtccaggtggtgggaagcctgcctcctttgtcaagtcctgca
gacaccaaagcagaatctttagtgaaggaaatgccagagagtgccctgcctgcagtacag
gcaagcacactggctgaatcaactcagaagataactgaaacagagtcagaaaaatctgct
cagtcactctctctaaatatcgaggagttagcaccaaccaaaggggtcactgaggaatct
ttgaagcagccatctttggaacagaaggaaggcctgagggcttctcctgcccttctgcct
agtcacggattaaaacggtcagccgactcctcctctagccgttcctcctcctcttcctcc
tccagttctaggtcaagatctcgctctccggacagctcaggctctcggtcccactcacct
ccaagatcccagcagagagatgtatctcaaccacacattctcaccaaccctcatggtcga
tccacaatgggttccagatctacatctgagtccagatcacgttcccgatctcgttctcgt
tcagcctcaagtaacagcagaaaatctctgagtcctggagtctccagggacagcagcacc
agctacactgaaaccaaagatctctcttctggtcaggaggttgtaactccaccagtgcca
caagtgcaggtccatgagccaaaggagaggacttccactccatcctctctccgagggagg
cgtctgagccagcctgaaccagaggaaaagcgtgtccttcagaggttacagcctgaaagg
ggtagcccaaagaagtgtgaagcggaagaggcagagccaccagctgccacacagccccaa
acctcagagattcagaccactcacctaccagaatcagaaaggactcaccatactgttgag
gagaaggaggaagtgaccatggacacaagtgaaaacagacctgaaagtgaggttccagag
ccccccgtgacgattggagaccaagtcagcaacgatgaccgcccagagggcagtgccgaa
gatgaggagaagaaagagagtgcgctgcccaaatcattcaagaggaagatctccgttgtc
tcagctaccaagggggtgccggctggaaacagtgacacagaggggggccagcctggtcgg
aagcggcgttggggagccagcacagcaactacacagaagaaaccgtccatcagcatcacc
accgagtcgctcaagagcctcatccccgacatcaaacccctggcggggcaggaggctgtt
gtggatcttcatgctgacgactcccgaatctctgaggatgagacggagcgtaatggcgac
gatgggacccatgacaaagggctgaaaatatgccggactgtcactcaggtagtgcctgct
gagggccaggagaatgggcagagggaagaggaagaagaagagaaggagcctgaagcagag
ccccctgcgccaccccaggtttcagtagaggtggcccttccaccgcctgtggagcacgaa
gtcaagaaagtgactttaggggataccttgacccgaagatccattagccagcagaagtct
ggagtctccatcaccattgatgatccagtgagaattgctcaggtgccctccccaccccgg
ggcaagatcagtaacattgtccacatctccaatttggtgcgccccttcactttaggccaa
ctgaaggaattgttgggacgaacgggaactctggtggaagaggccttttggattgacaag
atcaaatctcactgctttgtaacgtacgccacagtagaggaagctgttgccacccgcacg
gctctacatggggtcaaatggccccagtccaatccgaaattcctttgtgctgactatgcc
gagcaagatgagctggattatcaccggggcctcttggtggaccgtccctctgaagcgaag
acagaggagcaaggtgtcccacggcccctgcatcccccacccccacccccagcccagcca
ccacagcatccccgggcagagcagcgggagcaggagcgggcagtgagggaacagtgggca
gagcgggaacgggaaatggagcggcgagagcgaactcgatcagaacgtgaatgggatcgg
gacaaagttcgagaaggaccccgttcccgatcacgatcccgggaccgacgccgtaaggaa
cgtgcaaagtctaaagaaaagaagagtgagaagaaagagaaagctcaggaggagccacct
gccaagctgctggatgaccttttccgtaagaccaaggctgccccctgcatctactggctc
ccgctgaccgacagccagattgttcagaaggaggctgagcgggccgagcgggccaaggag
cgggagaagcggcggaaggagcaagaagaagaggagcaaaaggagcgggagaaggaagca
gagcgggagcggaaccgacagctggagcgggagaagcggagggagcatagccgggagagg
gacagggaaagagatcgggacagggaacgtgacaggggggatcgagatcgggacagggag
cgggaccgggaacgaggccgggagagggaccgcagagacaccaagcgtcacagccggagc
cggagtcggagcacacctgtgcgggaccggggtgggcgccgctag
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