Sorex fumeus (smoky shrew): 130042368
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Entry
130042368 CDS
T10594
Symbol
PRPF3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130042368 (PRPF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfum03041
]
130042368 (PRPF3)
Spliceosome [BR:
sfum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130042368 (PRPF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
130042368
NCBI-ProteinID:
XP_055990822
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All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELREGDIPEIEWWDSYIIPNGFDLREEKPKREDYFGITNLVEH
PAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLESTD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcgaagcgggagctggatgagctgaagccatggatcgagaagacagtgaag
agggtgctgggcttctcggagcccacggtggtcacagcagcgctgaactgcgtgggcaag
ggcatggacaagaagaaggcagctgaccacctgaaaccgtttcttgatgattctactctg
cgattcgtggacaaactgtttgaggccgtggaggaaggccggagctctcggcattccaag
tccagcagtgacaggagcaggaaacgagagctcaaggaagtatttggagatgactccgag
atttccaaggaatcgtcaggcgtgaagaagcggcggataccccgctttgaggaagtggaa
gaggaaccggaagtgatccctgggcctccctctgagagtcccggcatgctcaccaagctc
cagatcaagcagatgatggaggcggctacgcggcagatagaggaaaggaaaaagcagctg
agcttcattagccccccgacgcctcagccaaagactccctcttcctcccaaccagagcga
cttcccattggcaacactatccaaccctcccaggctgcaacgttcatgaacgatgctatt
gagaaagccaggaaggcggcggagctgcaagcccgcatccaagcccagctggcactcaaa
ccgggcctcattggcaacgccaacatggtgggcctggccaatctccatgccatgggcatt
gcccctccgaaggtggagttgaaagatcagactaagcccacaccgctgatcctcgatgag
caaggtcgaactgtggatgccacaggcaaggagattgagctgacacaccgaatgcctact
ctgaaggccaatattcgtgccgtgaagagggagcagtttaagcagcagttgaaagaaaag
ccatcggaagacatggagtctaataccttttttgatcctcgagtgtcaatcgccccttcc
cagcgccagagacgtacttttaagttccacgacaagggcaaatttgagaagattgctcag
cggttacggacaaaggctcagcttgagaagctgcaggcagaaatctcccaggcagctcgg
aaaacaggcatccacacttctaccagactggcactgatcgccccgaagaaggagctgagg
gaaggggacatccctgaaattgagtggtgggactcttacatcatcccgaatggctttgac
cttagagaggaaaagcccaagagagaagattatttcggaattacaaatcttgttgaacat
ccagcccaactgaaccctccagtcgacagtgacacgccagttactctgggcgtctatctt
accaagaaggaacaaaagaaacttcggagacaaacaaggagggaagcgcagaaggagcta
caagaaaaagtccggctgggcctcatgccccctccagagcccaaagtgagaatttcgaat
ctgatgagagtgttaggaacagaagctgttcaagaccccacgaaggtagaagcccatgtc
agagcacagatggcgaaaaggcagaaagcgcacgaagaggctaacgctgcccggaagctc
acagcggaacagagaaaggtcaagaaaattaaaaagcttaaagaagacatttcacagggg
gtgcacatatctgtgtatagagttcgaaatttgagcaacccagccaagaagttcaagatt
gaggccaatgctgggcagctgtacctgacgggggtagtggtactgcacaaggatgtcaac
gtggtggtagtggaagggggccccaaagcccagaagaaatttaagcgtcttatgctgcat
cggataaagtgggatgaacagacctcgaacaccaagggagacgatgatgaagaatctgat
gaggaagctgtgaagaaaaccaacaaatgtgtgcttgtctgggagggtacagccaaagac
cggagctttggggagatgaagttcaaacagtgcccgacagagaacatggctcgggagcac
ttcaaaaagcacggggcagagcactactgggacctggctctaagcgagtccgtgctggag
tccaccgactga
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