Sorex fumeus (smoky shrew): 130042381
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Entry
130042381 CDS
T10594
Symbol
PCDH10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130042381 (PCDH10)
Cell adhesion molecules [BR:
sfum04515
]
Cadherins
Protocadherins
130042381 (PCDH10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
130042381
NCBI-ProteinID:
XP_055990525
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MIVLFFFALLWMVEGVYCQLHYTVEEEQEHGTFVGNIAEDLGLDITKLSARRFQTVPNSR
TPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLENPLELFRVEIEVLDINDNPP
AFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRF
AELVLEKPLDREQQAVHRYVLTAVDGGGVGGGGGGGGGGAGGEGAGLPPQPPPPQLQRTG
TALLTIRVLDSNDNVPAFDQPVYTVSLPENSPPGTLVLQLNASDPDEGPNGEVVYSFSSH
LSPRARELFGLSPRSGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDAN
DNAPEISFSTVKEAVSEGAAPGTVVALFSVTDRDSDANGQVQCELLGDVPFRLKSSFKNY
YTIVTEAPLDREAGDAYTLTVVARDRGEPALATSKSIQVRVADVNDNAPRFSQPVYDVYV
TENNVPGAYIYAVSATDRDEGANAQLAYSILECQIQGMSVFTYVSINAENGYLYALRSFD
YEQLKDFSFQVEARDAGSPQALAGNATVNILIVDQNDNAPALVAPLPGRNGTPAREALPR
AAEPGYLLTRVAAVDADDGENARLTYSLLRGNDLNLFRLDWRSGELRTARRVPAKRDPQR
PYELVIEVRDHGQPPLSSTATLLVQLVDGAAEPGGAGAGAGAGAGGPGEALRPGRAGHGA
GHGAGHGGGGAETSLDLTLILIIALGSVSFVFLLAMIVLAVRCQKEKKLNIYTCLAGECC
PCCCGGGGAGPAGAAGGAGGAGPAGGAGCCGRQARARKKKLSKSDIMLVQSSGAPGSAAQ
VPVEEAGGFGSHHHSQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDAEHNPCGALVTGYG
DQQPDIISNGSILSSETKHQRAELSFLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDS
DHDATNRGQSAGMDLFSNCTEECKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSV
PDTEVFEAPEAQPGPERSFSTFGKEKALHSTLERKELDGLLSSTRAPYKPPYLKMSWRHL
CGDTATARGGSSPAKPRSQQGNAFPLSCVFK
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattcttctttgccttgctctggatggtggagggagtctactgccagctt
cactacacggtggaggaggagcaggaacatggcactttcgtggggaatatcgccgaggat
ctgggcttggacattacaaaactttcggctcgccgcttccagacggtgcccaactcgcgg
acgccgtacctggacctcaacctggagaccggggtgctgtacgtgaacgagaagatcgac
cgcgagcagatctgcaagcagagcccgtcgtgcgtgctgcacctggaggtcttcctggag
aaccccctggagctgttccgggtggagatcgaggtgctggacatcaacgacaacccgccc
gccttcccggagcccgacctgacggtggagatctcggagagcgccacgccgggcacccgc
ttccccctggagagcgccttcgacccggacgtgggcaccaactcgctgcgcgactacgag
atcacccccaacagctacttctcgctggacgtgcagacgcagggcgacggcaaccgcttc
gccgagctggtgctggagaagccgctggaccgcgagcagcaggcggtgcaccgctacgtg
ctgaccgccgtggacgggggcggcgtgggcggcggcggcggcggcggcggcggcggcgcg
ggcggggagggcgcggggctgcccccgcagccgccgccgccgcagctgcagcgcacgggc
acggccctgctcaccatccgcgtgctcgactccaacgacaacgtgcccgccttcgaccag
cccgtctacaccgtgtccctgcccgagaactcgccgcccggcacgctggtgctgcagctc
aacgccagcgaccccgacgagggccccaacggcgaggtggtctactccttcagcagccac
ctctccccgcgcgcgcgcgagctcttcggcctgtccccgcgcagcgggcgcctggaggtg
agcggcgagctggactacgaggagagccccgtgtaccaggtgtacgtgcaggccaaggac
ctgggccccaacgccgtgcccgcgcactgcaaggtgctggtgcgcgtgctggacgccaac
gacaacgcgcccgagatcagcttcagcaccgtgaaggaggcggtgagcgagggcgcggcg
ccgggcaccgtggtggccctgttcagcgtcaccgaccgcgactcggacgccaacgggcag
gtgcagtgcgagctgctgggcgacgtgcccttccgcctcaagtcctccttcaagaactac
tacaccatcgtcaccgaggcgccgctggaccgcgaggcgggcgacgcgtacacgctgacc
gtggtggcgcgcgaccgcggcgagccggcgctggccaccagcaagtccatccaggtgcgc
gtggccgacgtgaacgacaacgcgccgcgcttcagccagcccgtctacgacgtgtacgtg
accgagaacaacgtgccgggcgcctacatctacgccgtgagcgccacggaccgcgacgag
ggcgccaacgcgcagctcgcctactccatcctcgagtgccagatccagggcatgagcgtc
ttcacctacgtgtccatcaacgccgagaacggctacctgtacgcgctgcgctccttcgac
tacgagcagctcaaggacttcagcttccaggtggaggcgcgcgacgcgggcagcccccag
gcgctggccggcaacgccacggtcaacatcctcatcgtggaccagaacgacaacgcgccc
gcgctcgtggcgccgctgccgggccgcaacggcacgccggcgcgcgaggcgctgccgcgc
gccgccgagccgggctacctgctgacccgcgtggccgccgtggacgccgacgacggcgag
aacgcgcggctcacctacagcctgctgcggggcaacgacctcaacctgttccgcctggac
tggcgctcgggggagctgcgcaccgcgcgccgcgtgcccgccaagcgcgacccgcagcgg
ccctacgagctggtcatcgaggtgcgcgaccacgggcagccgccgctgtcgtccacggcc
acgctgctcgtgcagctggtggacggcgcggccgagcccggcggcgcgggcgcgggcgcg
ggcgcgggcgcggggggccccggggaggcgctgcggcccgggcgcgcgggccacggcgcg
ggccacggcgcgggccacggcggcggcggcgccgagacctcgctggacctcacgctcatc
ctcatcatcgcgctgggctccgtgtccttcgtcttcctgctggccatgatcgtgctggcc
gtgcgctgccagaaggagaagaagctcaacatctacacgtgcctggcgggcgagtgctgc
ccgtgctgctgcggcggcggcggcgcggggcccgcgggggccgcggggggcgcggggggc
gccgggcccgcggggggcgccggctgctgcggccgccaggcccgcgcgcgcaagaagaag
ctcagcaagtcggacatcatgctggtgcagagctcgggcgcgccgggcagcgcggcgcag
gtgcccgtggaggaggcgggcggcttcggctcgcaccaccacagccagaactactgctac
caggtctgcctgacccccgagtcggccaagaccgacctgatgttcctcaagccctgcagc
ccctcgcggagcacggacgccgagcacaacccgtgcggggccctcgtcaccggctacggc
gaccagcagcccgacatcatctccaacggcagcatcctgtccagcgagactaagcaccag
cgagcagagctcagctttctagttgacagacctcgccgagttaacagttctgcgttccag
gaagccgacatagtgagctctaaggacagtggtcacggggacagtgagcagggagatagt
gaccacgatgccaccaaccgcggccagtcagctggcatggatctcttctccaactgcacg
gaggaatgcaaagcactgggccactcggaccgctgctggatgccctcgttcgtcccctcc
gacggccgccaggccgctgactaccgcagcaacctgcacgtgccgggcatggactccgtc
ccggacaccgaggtgttcgaggcccccgaggcccagccgggccccgagcgctccttctcc
accttcggcaaagagaaggcgctacacagcacgctggagaggaaagagttggacggcctg
ctctccagcacacgcgcgccttacaaaccgccctacttgaagatgtcttggcggcacctg
tgtggggacactgcaactgcccgaggaggaagcagccctgcgaagccaaggagccagcag
ggaaacgcattcccgctcagctgtgtcttcaagtga
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