Sorex fumeus (smoky shrew): 130042447
Help
Entry
130042447 CDS
T10594
Symbol
RECQL
Name
(RefSeq) ATP-dependent DNA helicase Q1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130042447 (RECQL)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130042447 (RECQL)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
130042447 (RECQL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
RQC
NinF
KOW
Cas3-like_C_2
KOW4_SPT5
Snapin_Pallidin
SKA2
Motif
Other DBs
NCBI-GeneID:
130042447
NCBI-ProteinID:
XP_055990601
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MASVSALTEELDSVTSELHAVDIQIQELLERQQELLQRKSSLSRRIKQCLEASEAGEGSR
GDAAPATWNREDFPWSGKVKDVLQDVFKLQKFRLLQLETINATMSGKEVFLVMPTGGGKS
LCYQLPALCADGFTLVICPLISLMEDQLMVLKQLGVSATMLNASSSKEHVKWVHAEMVNK
NSQLKLIYVTPEKIAMSKMFMSRLEKAYEARRFRRVAVDEVHCCSQWGHDFRPDYKALGI
LKRQFPDTTLIGLTATATNHVLKDAQKILCVEHCLTFTASFNRPNLFYEVRQKPSSAEDF
IEDVVKLINGRYKGQSGIVYCFSQKDSEQVTMNLQKLGVRAGAYHANMEPEDKTRVHKRW
AANEVKVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDLKADCILYYGF
GDIFRISSMVVMENVGQQKLYEMVSYCQDVSRCRRALIAQHFDEVWDSEECDRMCDNCCK
DTAFEKKDITEYCRDLIKILQQAEGLNERLTPLKLLDAWSGKGPPKLRVAGVAPPTLPRE
DMEKVVVHGLLQQYLREDYSFTAYATISYLKTGPKAHLLKNAAHAVTMQVKKPTQNCLRT
EPSQACHPEGADRKKEGHSGNSQKRAADPAPSPKQTGAKKRKTVAV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtttcagccctcaccgaggagctggactcggtgaccagtgagctgcacgcg
gtggacatccagattcaggagctcctggagaggcagcaggagcttcttcagaggaaaagc
agcctcagcaggaggataaagcagtgcctggaggccagcgaggccggggagggcagccgt
ggggacgccgcgcccgccacctggaacagggaagatttcccgtggtccggcaaagtgaag
gatgtgctgcaggacgtctttaagctgcagaagttccggctgctgcagctcgaaaccatc
aatgccaccatgtcggggaaggaggttttcctggtgatgcccacgggtggagggaagagc
ttatgctaccagctacccgccttgtgtgccgacggttttacacttgtgatctgcccactg
atctctcttatggaagatcaactgatggttttaaagcagttaggagtgtcagctaccatg
ttgaatgcctctagttcaaaggaacacgtgaagtgggtccacgctgaaatggtgaacaaa
aactcccagctcaagctgatttacgtgacgccagagaagatcgccatgagcaagatgttc
atgtcgcggctggagaaggcctacgaggcccggaggttccgccgcgtcgccgtggacgag
gtgcactgctgcagccagtggggacacgacttcaggcccgattacaaggccctgggcatc
ttaaagcggcagttccccgacaccacgctcatcgggctgacggccacggccaccaaccac
gtcctcaaggacgcccagaaaatcctgtgcgtggagcactgcctcactttcacggcgtct
ttcaaccggccaaacctcttctacgaggttcggcagaaaccctccagcgcggaagatttc
atcgaggatgtggtcaagctcatcaacggcagatacaaaggacagtcaggcatcgtgtat
tgcttttcccagaaagactccgagcaggtcacaatgaatttgcagaagttgggggtccgg
gccggagcctaccatgccaacatggagcctgaagacaaaacccgggttcacaaaagatgg
gccgccaacgaggtcaaggtggtcgtggcaactgtggcgtttggtatggggattgataag
ccagatgtgaggttcgtcattcaccactcaatgagcaaatccatggagaattactaccag
gaaagtggccgcgcaggccgcgacgacctcaaggccgactgcatcctctactacggcttc
ggagacatcttccgcatcagctccatggtggtcatggagaacgtgggccagcagaagctc
tacgagatggtgtcctactgccaggacgtgagcaggtgtcgccgcgcactgatcgcgcag
cacttcgacgaggtgtgggactccgaggaatgcgacaggatgtgcgacaactgctgtaag
gacactgcctttgaaaagaaggacatcaccgagtactgcagagacctcatcaagatcctg
cagcaggccgaggggctgaacgagcggctcacgcccctcaagctgctggacgcctggtcg
gggaaggggccgcccaagctccgggtggcgggagtggcccctcccacactcccgcgggaa
gacatggagaaagtggtcgtccacggccttctccagcagtacctcagggaagattatagt
ttcacggcatacgctaccatttcatatttgaaaaccggaccaaaagctcatctgctcaag
aacgcggcccatgcagtcaccatgcaagtaaagaagccgacgcagaactgtctccggacg
gaaccgtctcaagcgtgtcatcccgaaggagctgacagaaagaaagaaggacactcagga
aactcccagaaaagagctgcagacccagctccgtcccctaagcaaacaggagccaagaaa
aggaaaactgtcgctgtgtga
DBGET
integrated database retrieval system
