Sorex fumeus (smoky shrew): 130042684
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Entry
130042684 CDS
T10594
Symbol
SHH
Name
(RefSeq) LOW QUALITY PROTEIN: sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04340
Hedgehog signaling pathway
sfum04360
Axon guidance
sfum05200
Pathways in cancer
sfum05205
Proteoglycans in cancer
sfum05217
Basal cell carcinoma
sfum05226
Gastric cancer
Brite
Peptidases and inhibitors [BR:
sfum01002
]
Cysteine peptidases
Family C46: hedgehog family
130042684 (SHH)
Glycosaminoglycan binding proteins [BR:
sfum00536
]
Heparan sulfate / Heparin
Morphogens
130042684 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130042684
NCBI-ProteinID:
XP_055990809
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Position
Unknown
AA seq
428 aa
AA seq
DB search
MLLPPLRCLLLLLLGCWLLARPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGA
SGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWP
GVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESK
AHVHCSVKAENSVAAKSGGCFPGSATVRLEQGGTKRVKDLRPGDRVLAADEQGRLLYSDF
LAFLDRDDGARKVFYVIETREPRERLLLTAAHLLFVAPPNATAAGRRRGAAPERRALFAS
RVRPGQRVYVVAERGGAPRLLPAAVHRVWLREEAAGAYAPLTAQGTILIDRVLASCYAVI
DEHGWAHRAFAPFRLAHALLQALAPARTDRAAAGAPGVHWYSRLLYRLGTWLLDGDALHP
LGMAVAPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgccgccgctgcggtgcctcctgctgctgctgctgggctgctggctgctggcg
cgccccgggctggcgtgcgggcccggcaggggcttcggcaagaggcggcaccccaagaag
ctcaccccgctcgcctacaagcagttcatccccaacgtggccgagaagaccctgggcgcc
agcgggaggtacgagggcaagatctccaggaactcggagcgcttcaaggagctcacgccc
aattacaaccccgacatcatctttaaggatgaggagaacacgggggccgaccggctgatg
actcagaggtgcaaggacaagctcaacgccctggccatctccgtgatgaaccagtggccc
ggcgtgaagctgcgggtgaccgagggctgggacgaggacggccaccactcggaggagtcg
ctgcactacgagggccgcgccgtggacatcaccacgtcggaccgcgaccgcagcaagtac
ggcatgctggcgcgcctggccgtggaggccggcttcgactgggtgtactacgagtccaag
gcgcacgtccactgctcggtgaaagcagagaactcggtggcggccaagtccggcggctgc
ttccccggctcggccaccgtgcgcctggagcagggcggcaccaagcgcgtgaaggacctg
cggcccggggaccgcgtgctggcggccgacgagcagggccggctgctctacagcgacttc
ctcgccttcctggaccgcgacgacggcgccaggaaggtcttctacgtgatcgagacgcgg
gagccgcgcgagcgcctgctgctcacggccgcgcacctgctcttcgtggcgccgcccaac
gccacggccgcggggcgccgtcggggggccgcgcccgagcgccgcgcgctcttcgccagc
cgcgtgcggccgggccagcgcgtgtacgtggtggccgagcgcggcggggccccgcggctg
ctgccggccgccgtgcaccgcgtgtggctgcgcgaggaggcggcgggcgcgtacgcgccg
ctcacggcgcagggcaccatcctcatcgaccgggtgctggcgtcgtgctacgccgtcatc
gacgagcacggctgggcgcaccgcgccttcgcgcccttccgcctggcgcacgcgctgctc
caggcgctggcgcccgcgcgcacggaccgcgccgccgcgggggcccccggcgtccactgg
tactcgcggctgctctaccgcctgggcacgtggctcttggacggcgacgcgctgcacccc
ctgggcatggccgtggcgcccagctga
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