Sorex fumeus (smoky shrew): 130042684
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Entry
130042684 CDS
T10594
Symbol
SHH
Name
(RefSeq) LOW QUALITY PROTEIN: sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04340
Hedgehog signaling pathway
sfum04360
Axon guidance
sfum05200
Pathways in cancer
sfum05205
Proteoglycans in cancer
sfum05217
Basal cell carcinoma
sfum05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130042684 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
130042684 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
130042684 (SHH)
05205 Proteoglycans in cancer
130042684 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
130042684 (SHH)
05217 Basal cell carcinoma
130042684 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfum01002
]
130042684 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfum00536
]
130042684 (SHH)
Peptidases and inhibitors [BR:
sfum01002
]
Cysteine peptidases
Family C46: hedgehog family
130042684 (SHH)
Glycosaminoglycan binding proteins [BR:
sfum00536
]
Heparan sulfate / Heparin
Morphogens
130042684 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
DUF7764
Motif
Other DBs
NCBI-GeneID:
130042684
NCBI-ProteinID:
XP_055990809
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MLLPPLRCLLLLLLGCWLLARPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGA
SGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWP
GVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESK
AHVHCSVKAENSVAAKSGGCFPGSATVRLEQGGTKRVKDLRPGDRVLAADEQGRLLYSDF
LAFLDRDDGARKVFYVIETREPRERLLLTAAHLLFVAPPNATAAGRRRGAAPERRALFAS
RVRPGQRVYVVAERGGAPRLLPAAVHRVWLREEAAGAYAPLTAQGTILIDRVLASCYAVI
DEHGWAHRAFAPFRLAHALLQALAPARTDRAAAGAPGVHWYSRLLYRLGTWLLDGDALHP
LGMAVAPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgccgccgctgcggtgcctcctgctgctgctgctgggctgctggctgctggcg
cgccccgggctggcgtgcgggcccggcaggggcttcggcaagaggcggcaccccaagaag
ctcaccccgctcgcctacaagcagttcatccccaacgtggccgagaagaccctgggcgcc
agcgggaggtacgagggcaagatctccaggaactcggagcgcttcaaggagctcacgccc
aattacaaccccgacatcatctttaaggatgaggagaacacgggggccgaccggctgatg
actcagaggtgcaaggacaagctcaacgccctggccatctccgtgatgaaccagtggccc
ggcgtgaagctgcgggtgaccgagggctgggacgaggacggccaccactcggaggagtcg
ctgcactacgagggccgcgccgtggacatcaccacgtcggaccgcgaccgcagcaagtac
ggcatgctggcgcgcctggccgtggaggccggcttcgactgggtgtactacgagtccaag
gcgcacgtccactgctcggtgaaagcagagaactcggtggcggccaagtccggcggctgc
ttccccggctcggccaccgtgcgcctggagcagggcggcaccaagcgcgtgaaggacctg
cggcccggggaccgcgtgctggcggccgacgagcagggccggctgctctacagcgacttc
ctcgccttcctggaccgcgacgacggcgccaggaaggtcttctacgtgatcgagacgcgg
gagccgcgcgagcgcctgctgctcacggccgcgcacctgctcttcgtggcgccgcccaac
gccacggccgcggggcgccgtcggggggccgcgcccgagcgccgcgcgctcttcgccagc
cgcgtgcggccgggccagcgcgtgtacgtggtggccgagcgcggcggggccccgcggctg
ctgccggccgccgtgcaccgcgtgtggctgcgcgaggaggcggcgggcgcgtacgcgccg
ctcacggcgcagggcaccatcctcatcgaccgggtgctggcgtcgtgctacgccgtcatc
gacgagcacggctgggcgcaccgcgccttcgcgcccttccgcctggcgcacgcgctgctc
caggcgctggcgcccgcgcgcacggaccgcgccgccgcgggggcccccggcgtccactgg
tactcgcggctgctctaccgcctgggcacgtggctcttggacggcgacgcgctgcacccc
ctgggcatggccgtggcgcccagctga
DBGET
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