Sorex fumeus (smoky shrew): 130042730
Help
Entry
130042730 CDS
T10594
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130042730
Membrane trafficking [BR:
sfum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130042730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
130042730
NCBI-ProteinID:
XP_055990888
LinkDB
All DBs
Position
Unknown
AA seq
1486 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPAQQEKLFGEKGS
ERFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSSLGKFDKGCVAAFLDVVIGGRAVETPPLSSVNLLEGLSRTVVYITYSQLLTLVNF
MKSVMSGDQLREDRMALDNLLANLPQAKPGKSSSLEMTPYSTPQLSPATTPANKKNRLPI
GQQLAAITAWESSATNLTAHITLVTPFAARSKSRTNVLMDLHMDHEGSSQETIQEIQPEE
VLVISLGTGPQLTPGMMSETEVLNMQLSDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECNSDFGGKDSVTSPDMDEVTHGAHP
LTSPPSQAESLLAMFDPLSSHEGASAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPN
FGSHILTPAEMEAFKQRHSYPERLVRSRSSDIVSSARRPMSDPSWNRRPGNEERELPPTA
AMGASLVAAPHSSSSSPSKDSSRGETEERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPFR
KKEKQEKDKDDLGPDRFSTLTDEPSPRLSAQAQVAEDILDKYRNAIKRTSPSEGALSNYE
SAEVLGDGESAQDSPRDDALQNISADDLPDSASQAAQPQDSAFSYRDAKKKLRLALCSAD
SVAFPVLTHSTRNGLPDHTDPEDNEIVCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFD
NRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTV
CVRLLLESKEKKIGEFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQD
AQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREA
PWPSAQAEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIK
ANPPCLLSTVQYISSFYASCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaactggatattcatactttggcccatcacctcaaacaggaacgcttatatgta
aactctgagaagcagctcattcaaaggcttaatgcagatgtacttaagacagctgaaaag
ttgtaccggacagcatggattgctaagcaacagagaattaatttggatcgacttattata
accagtgcggaagcttcccccgctgaatgttgccagcatgccaagattttggaagatacg
cagtttgttgatggatataagcagttgggatttcaggagactgcttatggagaattcctg
agtcgattacgggaaaaccctcggctcattgcctcttcattggttgccggagagaaactc
aatcaggagaacacacaaagtgttatttacacagtctttacttccctctatggtaactgc
attatgcaagaggatgaaagctacctccttcaggttttgagatacttgattgaatttgaa
cttaaagaaagtgacaaccctaggcgacttttgaggcgaggaacttgtgccttcagcatc
ttgtttaagcttttttctgaaggactcttttctgccaagctcttcctcacagctacttta
catgagccaatcatgcagctgctggttgaagatgaagatcacctggagacggatccaaac
aagctcattgagcggttttccccggctcaacaggaaaaactctttggagaaaaaggctca
gagaggttcaggcaaaaggttcaggagatggtggattccaatgaggccaagctcgtggct
ttggtgaacaagtttatcggctatctcaagcagaacacatactgctttccacatagtttg
cggtggatcgtgtcgcagatgtacaaaaccctttcctgtgtggacaggctggaagtaggg
gaggtcagggcaatgtgtactgacctcctgctggcctgcttcatctgtcctgcagttgtc
aacccagagcagtacgggatcatttccgatgctcccattaacgaagtggcaagatttaat
ctgatgcaggttggccgccttttgcagcagttagcaatgactggctcggaagagggggat
ccccggacaaagagcagcctgggaaaatttgacaaaggctgtgttgctgctttccttgat
gtggtcattgggggccgtgcagtggagacgcctcctctgtcctccgttaaccttctggaa
ggtttgagcagaaccgtggtttacataacctacagtcagcttctaactctggtgaatttt
atgaagagtgtgatgtctggagatcagctgagggaagacagaatggctcttgacaatcta
ctggccaatttaccccaggccaagccagggaagagcagcagcctagaaatgacgccctac
agtactccccagctctcaccggcaacgacccccgcaaataagaagaatcgattgcctata
ggacaacagttagcagccatcactgcctgggagtcctcagccaccaacctcactgctcac
attactctagtaaccccatttgcagctcggagcaaaagccgcaccaatgtgcttatggac
ttacacatggaccatgaagggtcgtctcaggaaaccatccaggaaatacagccagaagaa
gtgttggtcatttccctagggacaggcccacagctcactccagggatgatgtcagaaacc
gaggtcctaaacatgcagctttcggatggaggacaaggagatgtccctgtcgatgaaaac
aaactccacggtaaacctgataaaaccttgcgcttttccctctgcagtgataatctggaa
ggaatatctgaaggtccatcaaatcgatccaattcagtatcctctttagacctagaggga
gagtctgtctcagagcttggagcaggaccttctgggagtaatggtgtggaagccctgcag
ctcttggaacatgagcaagccacaacacaagataatctggatgataaactacggaagttt
gagatccgggacatgatgggactgacggatgacagggatatatcagaaacggtgagcgag
acctggagcacagacgtcttggggagtgattttgaccctaacattgatgaagatcgtttg
caggaaattgcaggtgccgcagcagagaacatgttaggcagtttactgtgcctgccaggg
tcaggctcagtgctccttgacccctgcactggctctaccatatcagagacaacaagcgaa
gcttggagtgtagaggtattgccaagtgactcagaagccccagatctgaagcaggaggag
cgtctgcaggaactggagagctgttccggcctgggcagcacctctgacgacacggatgtc
agggaggtcagttcccgccccagcacaccaggcctcagtgttgtgtcgggcataagtgca
acttctgaggatattcctaataagatagaagacctgagatctgagtgcaactctgatttt
gggggtaaagactctgtcactagcccagacatggatgaagtaactcatggtgcccacccc
ctgacctctccgccttcccaggcagagtctctgcttgccatgtttgatccactgtcttca
catgaaggggcttctgctgtggtccggccaaaagttcactatgcccggccgtcgcatcca
ccaccagaccccccaattctggaaggagctgtgggcggcaacgaggcccggttgcctaac
ttcgggtcccacattttaactccagctgaaatggaagcctttaagcaacggcattcttac
ccagagcggttagttcggagccggagttctgacatcgtgtcttccgcccggcggcccatg
agtgaccccagctggaaccgacgtcctgggaatgaggagcgagaactgcctccaaccgca
gctatgggtgcttctctggtggctgcccctcactcgtcatcgtcctccccgagcaaggac
tcctccagaggagagactgaagaacgcaaagatagtgatgatgagaaatcagacagaaac
agaccttggtggagaaaacgttttgtttcagccatgcctaaagctcccataccatttaga
aagaaagaaaaacaagaaaaagacaaagatgatctggggcctgacagattctcaacactc
acagatgagcccagccctcggctcagtgcccaggctcaggtggctgaggacattctggac
aagtacaggaatgccatcaaacgcaccagccccagtgaaggagcactgtcaaactatgaa
agtgcagaggtcttgggtgacggcgaaagtgcacaggattctcctcgtgacgacgcgctg
cagaacatctctgccgatgacctgccagactcggccagccaagccgcgcagccccaggac
tcggccttttcttacagagatgcaaagaagaaactgaggcttgctctttgctctgcggat
tccgttgctttcccagtgttaacccactcgacaaggaatggtttacccgaccacacagac
ccagaagacaatgaaattgtgtgcttcttaaaagttcaaatagcggaggcaattaatttg
caagataagaacttaatggcccaactccaggaaaccatgcgctgcgtgtgccgttttgac
aaccggacctgcaggaagctcctggcctccattgccgaggactacaggaaaagggcgccc
tacattgcttacctcactcgctgtcggcaagggctgcagaccacgcaggctcacctggag
aggctcctgcaaagggtcctgcgcgacaaggaggtggccaatcggtacttcaccaccgtc
tgtgtgcggctgctgttggagagcaaagagaagaagatcggggagttcattcaagacttt
cagaagctcacggccgccgatgataaaacggctcaggtcgaggacttcctgcagttcctc
tacggcgccatggcccaggatgtgatctggcagaacgccagcgaagagcagctgcaggac
gcccagctggccattgagcgaagcgtcatgaaccgcattttcaagcttgccttctacccg
aatcaggatggggacatacttcgtgaccaggttcttcatgagcacattcagcgattgtct
aaagtcgtgactgcaaatcacagagcgctccagataccagaggtttatctccgggaggcc
ccatggccatctgcacaggcagaaatccggaccatcagtgcttacaagacgccccgggac
aaagtgcagtgcatcctgagaatgtgctccaccatcatgaacctcctgagcctggccaac
gaggactccgtccctggagctgatgacttcgtccctgtgctggtcttcgtgttaatcaag
gcaaacccgccttgtttgctgtctacggttcagtatatcagcagcttctatgccagctgt
ctttccggagaggagtcctattggtggatgcagttcacggcagcagtagagttcattaaa
accatcgatgaccgcaagtga
DBGET
integrated database retrieval system
