KEGG   Sorex fumeus (smoky shrew): 130042856
Entry
130042856         CDS       T10594                                 
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
  KO
K04855  voltage-dependent calcium channel T type alpha-1H
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04010  MAPK signaling pathway
sfum04020  Calcium signaling pathway
sfum04713  Circadian entrainment
sfum04925  Aldosterone synthesis and secretion
sfum04927  Cortisol synthesis and secretion
sfum04929  GnRH secretion
sfum04934  Cushing syndrome
Brite
Ion channels [BR:sfum04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   130042856 (CACNA1H)
SSDB
Other DBs
NCBI-GeneID: 130042856
NCBI-ProteinID: XP_055991077
LinkDB
Position
Unknown
AA seq 2246 aa
MAEGAPAADEVRVPLGAPPPSPAGPGAAPPESPASERAADPGADEEPRVPYPALAATVFF
CLGQTTRPRSWCLRLVCNPWFEHVSMLVIMLNCVTLGLFRPCEDVECRSERCSTLEAFDD
FIFAFFAVEMVIKMIALGLFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTV
RVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCF
MDSTFVRNNNLTFLQPYYMPEEGEENPFICSTRRDNGMQKCSHIPSRRELRVECTLGWEA
YGQPTEGLGPGRNACINWNQYYNICRSGDSNPHNGAINFDNIGYAWIAIFQVITLEGWVD
IMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMREQRARYLS
NDSTLASFSEPGSCYEELLKYVGHICRKLRRRGLRLCARWQSRWRKKVDPSSVPQGQGSG
RRRSRGWHSASVHHLVYHHHHHHHHHYHLSHSSPRRPGPEPTTLDSRLVPAGAPPSPGHG
PDAESVHSVYHADCHVERPQERIQAVRATTAAASLKLAAGLGARNYPTILPSGMGGSKGG
TGPKGTRARGSPGTGGHSPLSLSPSPCEKIQHLVGEHGLGRAPSRLSGLSVPCPLPSPQA
GTLTCELGNCPYCARALDEAELELSGSDSGDSGAEGVYEFTQDVQHGDRRDPLQQCPASA
TSPGGSRRRSQQRASPSGQGGPGHIWGVLSRKLRRVVDSKYFNRGIMVAILTNTLSMGVE
YHEQPEELTNALEISNIVFTSVFALEMLLKLLACGPLGYIRSPYNIFDGVIVVISVWEIV
GQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMRTMDNVATFCTLLMLFIFIFSILG
MHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAAL
YFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSAHLEEDFDKLRGLGPADV
KMYTLAVTPNGHLDAGGSLPPPLIMRTAATPMPTPKNSPHLDAALGLLESRRGSSSSMDP
QLGDQKSLSSLRSSPCAPWGPNSAWSSRRCSRHSLGRAPSLKRRGQGGERESLLSGEGKG
STDDEAEDGRPSAHSPQPTRLQDCDGHVLALPSEFFLRVDSSKDDAGELDEDMEDSCCSR
LHKVLEPYKPEWCRRREPCALYLFSPQNRFRVSCQKLIAHKLFDHVVLVFIFLNCITIAL
ERPDIDPGSNERIFLSASNYIFTAIFVAEMMVKVVALGLVSGEHAYLQSSWNVLDGLLVL
VSLVDIIVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNI
VLICCAFFIIFGILGVQLFKGKFYYCEGPDTRNISTKAECRAAHYRWVRRKYNFDNLGQA
LMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVPNHNPWMLLYFISFLLIVSFFVLNMFVGV
VVENFHKCRQHQEAEEARQREEKRLRRLERKRRSTFPNPEAQRRPYYADYPPTRRSIHSL
CTSHYLDLFITFIIGVNVITMSMEHYDQPKSLDEALKYCNYVFTIVFVIEAVLKLVAFGF
RRFLKDRWNQLDLAIVLLSIMGITLEEIEMSAALPINPTIIRIMRVLRIARVLKLLKMAT
GMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFTN
FGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLGYLPAISPVYFVTFVLVAQFVLVN
VVVAVLMKHLEESNKEAREDAELDAELDAELELERAPGPSTRPPPTAPESPPLLAVRKVS
ASRALSLPNDSYMFRPVVPAMAPRPQPLQELELEVYAGAPSGSTSSPRSPPASPWTSPQM
PSVTTSPSSGRDAPQAAAPSPRGPTHSPSLSRLLCRQEAVCMDGSEGQADGSKDGAEDWA
QSEGKDSSRGSSPRSPPCSPRPASTQARKPAPGQRSVPSLPPALGGGEAPDPTDEEVSHI
TSAAPPGPGSAGGFLELPGRPSEPCWAPSELGGDAGPGAELASGARRKKKMSPPCISVEP
PAEDDGAARPPGAEAGCSTLRRRTPSCEPAPHRDTQELTEGPGPDPAPKVERRLHGPCRT
EHLAVPNFAFESLDKGGPSGDSLPRDISHGAVTDPSASAPGTTAPSEPPCPPRGSPERGR
GPHLGVPQSSPSRGGTAPEDSTAEPM
NT seq 6741 nt   +upstreamnt  +downstreamnt
atggccgagggcgcgccggcggccgacgaggtgcgggtgcccctgggcgcgccgcccccg
agcccggccggccccggcgcggcgccccctgagagcccagcgagcgagcgcgccgcggac
ccgggcgccgacgaggagccgcgcgtcccgtaccccgcgctagccgccaccgtcttcttc
tgcctcgggcagaccacgcggccgcgcagctggtgtctgcggctggtgtgcaacccgtgg
ttcgagcacgtcagcatgcttgtcatcatgctcaactgtgtcaccctgggcctgttccgg
ccctgtgaggacgtagagtgccgctccgagcgctgcagcaccctggaggccttcgatgac
ttcatcttcgccttcttcgcggtggagatggtcataaagatgattgcgctgggcctcttc
gggcagaagtgctacctgggcgacacctggaacagactcgacttcttcatcgtcatggcg
ggcatgatggaatactccctggacggacacaacgtgagcctctcggccatccgaaccgtg
cgcgtactgcggccacttcgtgccatcaaccgtgtgcccagcatgcggatcctggtcacg
ctgctgctggacactctgcccatgctgggcaatgttcttctcctctgcttctttgtcttc
ttcatcttcggcattgtgggtgtccagctctgggctggcctgcttcgcaaccgctgcttc
atggacagcacctttgttaggaacaacaacctcaccttcctgcagccttactacatgcca
gaggagggcgaggagaaccccttcatctgctccacgcgccgggacaacggcatgcagaag
tgctcgcacatccccagccgccgcgagctgcgcgtggagtgcacgctgggctgggaggca
tacgggcagccgaccgagggcctgggccccggccgcaatgcctgcatcaactggaaccag
tactacaacatctgccgttccggtgactccaatccccacaacggtgccatcaacttcgac
aacatcggctacgcctggattgccatcttccaggtgataacgctggagggctgggtagac
atcatgtactacgtcatggacgcacactccttctataacttcatctatttcattctgctc
atcatcgtgggctccttcttcatgatcaacctgtgcctggtggtgatcgccacacagttc
tcggagacgaagcagcgggagcaccagctgatgcgggagcagcgggcgcggtacctgtcc
aacgatagcacgctagccagcttctcagagccgggcagctgctacgaggagctcctgaag
tacgtgggccacatctgccgcaagctccggcgccgaggcctgcgtctctgtgcccgctgg
cagagccgctggcgcaagaaggtggacccaagcagcgtgccccaaggccagggctcgggg
cgccggcggtcgaggggctggcactccgcctccgtgcaccacctggtgtaccaccaccac
caccaccaccaccaccattaccaccttagccacagcagcccacgccggcctggccctgag
cccaccaccctggatagcaggctggtgcctgctggggcacccccctcgcctggccacggg
cccgatgccgagtcggtgcacagcgtgtaccatgccgactgccacgtggaacggccgcag
gagaggatccaggccgtgcgcgccaccaccgctgctgccagcctgaagctagccgcaggg
ctgggcgccaggaactaccccaccatcctgccctcgggcatgggcggaagcaaaggtggc
actgggcccaaggggacccgggcccgtgggtctccgggcactggagggcacagtcccctg
agcctgagccccagcccctgtgagaagatccagcacctggttggggagcatggtctgggc
cgggcccccagccgcctgtcgggcctgagtgtgccctgcccgctgcccagtccacaggca
ggtaccctcacctgtgagctgggcaactgcccctactgtgcccgcgccctggacgaggcc
gagctggagctgagcggctctgacagtggggactcgggagctgagggggtgtacgagttc
acgcaggacgtgcagcacggagaccgccgggaccccctgcagcagtgccccgccagcgcg
accagtcccgggggctcgcggcggcggtcccagcagcgagcatcccccagcgggcagggt
gggccaggccacatctggggtgtcctcagcaggaagctgcgccgcgtcgtggacagcaag
tacttcaaccgtgggatcatggtggccatcctcaccaacacactcagcatgggcgtcgag
taccacgagcagcctgaggagctgaccaacgccctggagatcagcaacatcgtgttcacc
agtgtgttcgccctggagatgctgctgaagctgctggcctgcgggcctctcggctacatc
cgcagcccctacaacatcttcgacggtgtcatcgtggtcatcagtgtctgggagatcgtg
ggccaggcggacggcgggctgtcggtgctgcggaccttccggctgctgcgggtgctcaag
ctggtgcgcttcatgcccgcgctgcggcggcagctggtggtactcatgcgcaccatggac
aacgtggccaccttctgcacgctgctcatgctcttcatcttcatcttcagcatcctcggc
atgcatctcttcggctgcaagttcagcctgaagacggacacgggggataccgtgcctgac
aggaagaacttcgactcgctgctgtgggccattgtcaccgtgttccagatcctcacacag
gaggactggaacgtcgtgctctacaatggcatggcctccacctcctcctgggctgccctc
tacttcgtggccctgatgacctttggcaactacgtgctcttcaatctgctggtggccatc
ctggtggagggcttccaggcagagggcgacgccaacagatcagacacggatgaggacaag
acgtcagcccacctggaggaggatttcgacaaactccgaggcctggggcctgcggatgtg
aagatgtacacgctggcggtgacccccaatgggcacctggacgctgggggcagcctgcct
cctcccctcatcatgcgcaccgcagccacccccatgcccaccccaaagaactccccacac
ctggatgctgccctgggcctcctggagtctcgtcgtgggagcagcagctctatggatccc
cagctgggggaccagaagtccctgtccagtctccgcagctccccctgcgcgccctggggc
cccaacagcgcctggagcagccgtcgctgcagccgccacagcctgggccgcgcgcccagc
ctcaagcgcaggggccagggcggcgagcgcgagtccctgctctcgggcgagggcaagggc
agcacagacgatgaggcggaggatggccggcccagcgcccacagcccgcagcccaccagg
cttcaggactgcgacggacatgtgctggccctgcccagcgagttctttctgcgcgtggac
agcagcaaggatgacgccggggagttggacgaggacatggaggacagctgctgctcccgc
ctgcacaaggtcctggagccctacaagcctgagtggtgccggcggcgggaaccctgcgcc
ctgtacctcttctccccgcagaaccgcttccgggtctcctgccagaagctcatcgcccat
aagctcttcgaccacgtggtcctcgtcttcatcttcctcaactgcatcaccatcgccctg
gagcggccggacatcgaccctggcagcaatgagcgcatcttcctcagcgcctccaactac
attttcacggcgatcttcgtggccgagatgatggtgaaggtggtggccctgggcctggtc
tccggtgagcacgcctacctgcaaagcagctggaacgtgctggacgggttgctggtcttg
gtgtccctcgtggacatcattgtggccatggcctctgcgggtggcgccaagatcctgggc
atcctgcgagtgctacgtctgctgcggaccctcaggccactgagggtcatcagccgagcc
cctggcctgaagctggtggtggagacactgatctcctctctcagacctatcgggaacatc
gtgctcatctgctgtgccttcttcatcatcttcggcatcctgggggtgcagctctttaag
gggaagttctactactgcgagggcccggacaccaggaacatttccaccaaggctgagtgc
cgggctgcccactaccgctgggtgcggcgcaaatacaacttcgacaacctgggccaggcc
ctgatgtccctgttcgtgctgtcgtccaaggacggctgggtgaacatcatgtacgacgga
ctggacgctgtgggcatcgaccagcagcccgtgcccaaccacaacccctggatgctgctc
tacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggcgtg
gtggtggagaacttccacaagtgccggcagcaccaggaggccgaggaggcacggcagcgg
gaggagaagcggctgcggcggctggagagaaaacgccggagcactttccccaacccagag
gcccagcgccggccctactatgccgactacccccccacccgccgctccatccactccctg
tgcaccagccactatctggacctcttcatcaccttcatcatcggcgtcaacgtaatcact
atgtccatggagcactacgaccagcccaagtccctggatgaggccctcaaatactgtaac
tacgtcttcaccatcgtcttcgtcattgaggccgtgctgaagctggtggccttcggcttc
cggagattcctcaaggacaggtggaaccagctggacctggccatcgtgctgctgtccatc
atgggcatcacgctggaggagatcgagatgagcgcggcgctgcccatcaaccccaccatc
atccgcatcatgcgtgtgctgcgcatcgcccgcgtgctgaagctgctgaagatggccaca
ggcatgcgggctctgctggacacagtggtgcaggcgctgccgcaggtagggaacctcggc
ctccttttcatgctcctgttttttatctatgctgccctgggagtggagctgtttggaaga
ctcgagtgcagcgaggacaacccgtgtgagggcctgagccgccacgccaccttcaccaac
ttcggcatggccttcctcacgcttttccgcgtgtccacgggggacaactggaacggcatc
atgaaggacacgctgcgcgagtgcgcccgtgaggacaagcactgcctgggctacctgccc
gccatctcgcccgtctacttcgtcaccttcgtgctggtggcccagttcgtgctggtcaac
gtggtggtggccgtgctcatgaagcacttggaggagagcaacaaggaggcgcgggaggac
gccgagctggacgccgagctggacgccgagctggagctggagcgggccccgggtccctct
acccggccgccgcccacggccccggagagccccccactcctggctgtgcgcaaggtgtcc
gcatcccgagcgctctcgctgcccaacgacagctacatgttccggccggtggtgcccgcc
atggccccgcggccccagccgctgcaggagctggagctggaggtctacgcaggggcaccc
tcgggctccacctcctccccacgctcgccgcccgccagcccctggacgtccccgcagatg
ccctcggtcaccacctctccttccagcggcagagacgccccccaggctgcagccccttcc
ccccggggcccgactcacagccccagcctcagccggctgctctgcaggcaggaggcagtg
tgcatggatggctcggaaggacaggcggacggctccaaggatggtgccgaggactgggcg
cagtctgaaggaaaggattcttcccggggctcctccccacgttccccaccctgctctccc
aggcccgccagcacccaagcccgcaagccagccccgggacagcgcagcgtccccagcctg
cccccggcactgggcggcggggaggcgccagaccccactgacgaggaggtcagccacatc
accagcgcggcgcccccagggcccgggtcagcaggcggcttcctggagctgccggggcgg
ccgtcagagccgtgctgggcaccatcggagctgggtggggacgcggggccgggggcagag
ctggcctcgggggcacggcggaagaagaagatgagccccccctgcatctccgtggagccc
cccgcggaggacgacggtgcggcacggccacctggggcggaggctggctgcagcaccctc
cgccgccgaaccccgtcctgtgagccggccccccacagggacacccaggagctcaccgag
ggcccggggccggaccctgcccccaaggtcgagcggcggctgcacggcccctgccgcacc
gagcacctggctgtccccaactttgcctttgagagcctggacaagggggggcccagtggg
gactcgctgccacgggacatcagccacggggcggtcacagaccccagcgcttctgcccct
gggaccacagcaccctcagagcccccttgcccccccaggggttccccagaacgggggcga
gggccacatcttggcgtcccccagagctcccccagcagaggagggacggcccctgaggac
agcacagctgagcccatgtag

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