Sorex fumeus (smoky shrew): 130042888
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Entry
130042888 CDS
T10594
Symbol
RHBDL1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfum01002
]
130042888 (RHBDL1)
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
130042888 (RHBDL1)
Peptidases and inhibitors [BR:
sfum01002
]
Serine peptidases
Family S54: Rhomboid family
130042888 (RHBDL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580
Motif
Other DBs
NCBI-GeneID:
130042888
NCBI-ProteinID:
XP_055991107
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MRYSRAGVFPLLAGPALRLGVQARPQPWLAASLPQQLDPENTGFIGADTFTGLVHSHELP
LDPAKLDMLVALAQSNERGQICYQELVDLISSKRSSSFKRAIANGQRALPQDGLLDEPGL
GVYKRFVRYVAYEILPREVDRHWYFYRQRSCPPPVFMASVTLAQIIVFLCYGARLNKWVL
QTYHPEYMKSPLVYHPSHRARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLR
ISLLYLAGVLAGEGARVPGPSPAGPALTAPLVHRLPDGLHHRYAGPCGGGLRRSLRALLC
TPGQRRHELGWDALPLQVAADGAGSGVHELGGGPGRVAPLLPSPARLGPSAQLHGAPGGC
RGGREHGPDHPAQLRGAPAGPVRLVGGAVGLQHLSALRHLLEHLCLRPAGRPHPPAALMC
SLEPHI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcggtacagcagggctggagtcttccctctcctggccggcccagccctgaggctgggg
gtccaggcccgccctcagccctggctggcggcctccctacctcagcagctggaccctgag
aatacgggcttcatcggcgcggacaccttcactggcctagtgcacagccatgagctgcct
ctggacccagccaagctggacatgctggtggccctggcccagagcaacgagcggggccag
atctgctaccaagagctggtggacttgatcagcagcaagcgctccagcagcttcaaacgt
gccatcgccaatgggcagcgggcactgccacaggatgggctgctggatgagccaggcctg
ggggtttacaagcgcttcgtgcgctacgtggcctatgagatcctgccccgagaagtggac
cgccattggtacttctaccggcaacgcagctgcccgcccccagtcttcatggcatccgtc
actctcgcccagatcatcgtgttcctgtgctatggagctcgcctcaacaagtgggtgctg
cagacctaccatccagagtacatgaaaagccccctcgtgtaccaccccagccaccgtgcg
cgggcttggcgcttcctcacctacatgttcatgcacgtggggctggagcagctgggcttc
aacgcgctcctgcagctgatgatcggggtgccgctggagatggtgcacgggctgctccgc
atcagcctgctctacctggccggcgtgctggcaggtgagggagcgcgggtgcccggcccc
tccccagctggcccagccctcacggctcctcttgttcacaggctccctgacggtctccat
caccgatatgcgggcccctgtggtggggggctcaggaggagtctacgcgctctgctctgc
acacctggccaacgtcgtcatgaactgggctgggatgcgctgcccctacaagttgctgcg
gatggtgctggctctggtgtgcatgagctcggaggtgggccgggccgtgtggctccgctt
ctcccctcccctgcccgcctcgggccctcagcccagcttcatggcgcacctggcgggtgc
cgtggtgggcgtgagcatgggcctgaccatcctgcgcagctacgaggagcgcctgcggga
ccagtgcggctggtgggtggtgctgttggcctacagcacctttctgctcttcgccatctt
ctggaacatctttgcctacgacctgctgggcgcccacacccccccgccgccctgatgtgc
tccctggagccacacatctga
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