Sorex fumeus (smoky shrew): 130042920
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Entry
130042920 CDS
T10594
Symbol
IRX1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130042920 (IRX1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130042920 (IRX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
130042920
NCBI-ProteinID:
XP_055991162
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MSFPQLGYPQYLGAAGPGAYGAERPGVLAAAAAAAAASSGRPGAAELGAGAGAVTSVLGM
YAAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHSAPAYYPYGQF
QYGDPGRPKNATRESTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARR
RLKKENKVTWGARSKDQEDCGALFGSDTEGEPEKAEDDEEIDLESIDIDKMDEHDGDQSN
EDDEDKAEPPRAPAVPPVLSRDPGSPLAAADALKPQDSPQGLAKEGAEPGSTRLLSPGAA
AAGLQGAAHSKPKIWSLAETATSPDGAPKTSPPPPPAAHAGAPLQHPAFLPSHGLYTCHI
GKFSNWTNGAFLAQGPLLNVRSFLGVGAPHAAPHAPHLPVPPPPPPLAVAAGALHGDKGS
ARSSPALPERDLPRPDSPAQQLAPFQPLRDNSLAPPEGAPRILAALPSA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggctacccgcagtacctgggcgccgcggggcccggcgcctac
ggggccgagcgcccgggggtcctggcggccgccgccgccgccgccgccgcctcgtcgggc
cggccgggcgcggcggagctgggcgcgggcgcgggcgcggtcacctcggtgctgggcatg
tacgcggcggccgggccgtacgccggcgcgcccaactacagcgccttcctgccctacgcc
gccgacctcagcctcttctcgcagatgggctcccagtatgaacttaaggacaaccccggg
gtgcaccctgccaccttcgctgcccactctgcacccgcctactacccctatgggcagttc
cagtacggggacccggggaggcccaagaacgcgacgcgggagagcaccagcacgctcaag
gcctggctgcaggagcaccgcaagaacccctaccccaccaagggcgagaagatcatgctg
gccatcatcaccaagatgaccctcacgcaggtctccacctggttcgccaacgcgcgccgg
cgcctcaagaaggagaacaaggtgacgtggggcgcgcgcagcaaggaccaagaggactgc
ggcgcgctcttcgggagcgacacagagggggagcccgagaaggctgaggacgacgaggag
atcgacctggagagcatcgacatcgacaagatggacgagcacgacggtgaccagagcaac
gaggacgacgaggacaaggccgagcccccacgcgcgcccgccgtgccccccgtgctctcc
cgggaccccggctcgccgctggcggccgccgacgccctcaagccccaggactcgccccag
ggcctggccaaggagggagccgagccgggcagcacgcgcctgctgagcccgggcgccgcc
gcggccggcctgcagggcgccgcgcacagcaagcccaagatctggtccctggccgagacg
gccacgagccccgacggcgcgcccaagacctcgccgccgccgccgcccgccgcgcacgcg
ggcgcacccctgcagcaccccgccttcctgcccagccacggactgtacacttgccacatc
ggcaagttctccaactggaccaacggcgccttcctggcgcagggcccgctgctcaacgtg
cgctccttcctgggcgtcggcgcgccccacgccgcgccccacgcgccgcacctgcccgtg
ccgccgccgccgccgcccctcgccgtggccgccggggcgcttcacggggacaaaggctcg
gcccgcagcagcccggcgctcccagagagagaccttccccggcccgactcgccggcgcag
cagttagcgcccttccagccgctgcgggacaactccctggccccgcccgagggcgcgccg
cggatcctcgccgccctcccctccgcctga
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