Sorex fumeus (smoky shrew): 130042938
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Entry
130042938 CDS
T10594
Symbol
ABCA3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130042938 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfum02000
]
130042938 (ABCA3)
Transporters [BR:
sfum02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130042938 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
RsgA_GTPase
AAA_29
AAA_15
AAA_23
AAA_30
SRP54
Motif
Other DBs
NCBI-GeneID:
130042938
NCBI-ProteinID:
XP_055991191
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MAVLRQLGLLLWKNFTLQRRKVLVTVLELVLPLLFSGILIWLRLKIQSENVPSATVYPRQ
DIQSLPLFFSFPPPGGAWELVYIPARSTAVQGVAESVRRALGLNLRLRGFPSEKEFEDYI
RYDNHSSDVLAALVFEHTFEHSQEPLPLAVRYHLRFSSTRRNYMWTRAGSGFLRDTEGWH
TTSLFPLFPSLGPREPAAPDGGEPGYILEGFLAVQHAVDRAVMEQHANASARQLLSALTV
KAQRFPYPPFISDPFLVAVQYQLPLLLMLSFTYTALTVIRAVVQEKEQKLKEYMRVMGLS
TWLHWSAWFLLFFLFLLLIVSFMTLLFCVKVKKDVAVLAHSDPSLVLVFLACFAVSTIAF
SLMVSSFFSRANMAAAVGGFLYFLTYIPYFFVAPRYNWMTQNQKLVSCLLSNMAMAMGAQ
LLGKFEAKGVGVQWRDLLSPVNVDDNFSFGHALGMLLLDSLLYCLVAWYADAVLPGQFGM
PQPWYFFLLPSYWCGGPRAALGKEDEDEDPEKAANTEYFEAEPEDLVAGIKIKHVSKLFC
VGSKDKAAVRDLSLNMYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYIGGYEISRD
MAQIRKSLGLCPQHDVLFDNLTVAEHLSFYAQLKGLSQHKCPEEVKRLLHTLGLEDKRDT
RSRYLSGGMKRRLSIGIALIAGSKVLMLDEPTAGMDAVSRRAIWDLLQQQKRARTILLTT
HFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEAQCDPEAVARLVRHH
VPNATLESNAGAELSFILPKESTHRFEGLFAKLEQQQKELGIASFGASVTTMEEVFLRVG
KLVDSSLDIQAIQLPALQYQHERRASDWAVDGQLCGIMDPSDGVGALIQEEGGTFQLNSG
LALHGQQFWAMLLKKATYSWREWKLAAAQALVPLTCITLALLAIDYSAEILDDPLLRLTL
GAYGHTVVPFSVPSPLGQRLAEHWKDMLQAEGQEPREVLGDLEEFLIFRASVEGGGFNER
CLAAATFQTEGARTVITALFNNQAYHSPATALALVDNLLFKLLCGPQASLTVSNYPQPRS
ALQAAKDQFNQGRKGFDLALNLLFAMAFLASTFAVLAVGERAVQAKHVQMVSGVRVATFW
LSALLWDLLSFLVPSLGLLVVFKAFDVHAFTRDGHLADALLLLLVYGWAIVPHMYLLSFL
FSGAAMAYTRLTIFNILSGIATFLVVTIMRIPEVKLEELSRTLDHVFLVLPNHCLGMAVS
SFYENYETKRYCTSSEVAAQYCKKYKIQYQENFYAWNAPGVGRFVASMATSGLVSLVLLF
LLETDLLWRLRARLCTLRGGRTLTEAYAQASVLPEDQDVVEEKNRVMAYGPGPLPDTPLV
VKELSKVYPQRTPLLAVHGLCLAVHKGECFGLLGFNGAGKSTTFKMLTGEETITSGDALV
GGYSVCSDIGKVRQRIGYCPQFDALLDHMTGRETLVMYARLRGLPERHIAACVEHTLRAL
LLEPHADKLVRTYSGGNKRKLSTGIALLGEPAVIFLDEPSTGMDPVARRLLWDTVARARE
AGKAIVITSHSMEECEALCTRLAIMAHGQLRCLGSPQHLKSRFGSGYGLRAKVRSHGRQE
ALQEFKAFVHLTFPGSVLEDEHQGMVHYHLPGEDLSWAKVFGTLEKAKEQYGLDDYSVSQ
ISLEQVFLSFAHLQPPLEAEGP
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctccggcagctgggcctgctcctctggaagaactttaccttgcagaggcgg
aaggtcctggtgacggtcctggagctggttctgcccttgctgttctccgggatcctcatt
tggcttcgcctgaagatccagtcggagaatgtgcccagcgccacagtgtacccgcgccag
gacatccagagcctgcccctgttcttcagcttcccgcctccagggggcgcctgggagctg
gtgtacatcccagctcgcagcacagcggtccagggtgttgctgagtccgtccgccgggcg
ctggggctcaacctccgactccgtggcttcccctcggagaaggagtttgaggactacatc
cgctacgacaaccactcctcagacgtgctggccgcgctggtgttcgagcacacctttgag
cacagccaggagccgctgccactggcggtcaggtaccacctgcgcttcagctccacgcgg
cggaactacatgtggacgcgggcgggatccggcttcctgcgggacacggagggctggcac
accacctccctcttcccgctcttccccagtctgggcccccgggagccagcagcccctgac
ggaggagagccggggtacatcctggagggcttcctggctgtgcaacacgccgtggaccgg
gctgtcatggaacagcacgccaacgcctctgcccgccagctgctgagcgcactcaccgtg
aaggctcagcgcttcccctacccgcccttcatctccgacccctttctcgtggccgtccag
taccagctgcccctgctgcttatgctcagcttcacctacacagcgctcaccgtcatccgg
gccgtcgtgcaggagaaggagcagaagctcaaggagtacatgcgcgtgatggggctcagc
acctggctgcactggagcgcctggtttctcctgttcttcctcttcctcctcctcatcgtc
tccttcatgaccctgctcttctgtgtcaaggtgaagaaggacgtggcggtgctggcgcac
agtgacccatcgctggtgctggtcttcctggcctgcttcgcagtgtccaccatcgccttc
agcctcatggtcagcagcttcttcagcagagccaacatggcggcagctgtggggggcttc
ctctacttcctcacctacatcccatacttcttcgtcgctccccgctacaactggatgacg
cagaaccagaagctcgtctcctgcctcctgtccaacatggccatggccatgggggcccag
ctcctcgggaagtttgaggcaaagggtgtgggcgtccagtggcgagacctgctcagcccc
gtcaacgtggacgacaacttctccttcgggcacgcgctgggcatgctgctgctggactcg
ctgctgtactgcctggttgcctggtacgcggatgcagtgctgcctgggcagtttggaatg
cctcaaccctggtacttcttcctgctgccctcgtactggtgcggaggcccgagagcagct
ttagggaaggaagatgaggacgaggaccccgagaaagccgccaacaccgagtactttgaa
gccgagcccgaggacctggtggccgggatcaagatcaagcacgtgtctaagctattctgc
gtggggagcaaggacaaggcagccgtcagagacctgagcctcaatatgtatgagggacag
atcaccgtcctgctgggccacaatggtgcgggcaagaccaccacgctgtccatgctgacc
ggtctctttccccccaccagcgggcgggcctacatcggtgggtacgagatctctcgagac
atggctcagatccggaagagcctgggcctgtgcccgcagcatgatgtcctgtttgacaac
ctgacggtggccgagcacctaagtttctacgctcagctgaaagggctgtcccagcacaag
tgcccggaggaggtcaaacgcctgctgcacaccctgggcctggaggacaagcgggacacg
cgaagccggtacctgagtggcggcatgaagcgccggctctccattggcatcgcgctcatc
gcaggctccaaggtgctaatgctggacgagcccacggcgggcatggacgcagtctccagg
agagccatctgggaccttctccagcagcagaaacgtgcccgcaccatcctgctgaccacc
cacttcatggacgaggccgacctgctgggggaccgcatcgccatcatggccaagggcgag
ctgcagtgctgcgggtcctcgctcttcctcaagcagaagtatggtgctggctaccacatg
acgctggtgaaggaggcgcagtgcgaccctgaggctgtcgccaggctggtgagacaccat
gtccccaacgccacactggagagcaatgcgggtgctgaactgtccttcatccttcccaag
gagagcacccacaggttcgaaggcctgttcgccaagctggagcagcagcagaaggagttg
ggcatcgccagctttggggcgtctgtcaccaccatggaggaggttttcctgcgggtcggc
aagctggtggacagcagcttggacattcaggccatccagctacctgccctgcagtaccag
catgagaggcgggccagcgactgggcagtggacggccagctgtgcggcatcatggacccg
agtgatggcgttggggcgctcattcaggaggaaggcggcaccttccagctcaacagcggg
ctcgccctgcacggccagcagttctgggccatgctcctgaagaaggcgacgtacagctgg
cgcgagtggaagctggcggcagcccaggcgctggtgccactcacctgcatcacgttggcc
ctgctggccatcgactactcggctgagatcctcgacgaccctctcctgaggctgacgctg
ggcgcgtacggccacacggtggtgcccttctccgtgccctccccgctgggccagcgattg
gccgagcactggaaggacatgctgcaagccgagggccaggagccccgcgaggtgctgggt
gacctggaggagttcctgattttcagggcctcagtggaagggggcggcttcaatgagcgc
tgcctggccgcggcgaccttccagacggagggcgcgcgcacggtcatcacggccctgttc
aacaatcaggcgtaccactccccggccacggcgctggccctcgtggacaacctgttgttc
aagctgctgtgtggcccgcaggcctccctcactgtctccaactacccgcaaccccgcagc
gccctgcaggccgccaaggaccagttcaaccagggccggaaggggttcgacctcgccctc
aacctgctcttcgccatggccttcctggccagcacttttgccgtgctggcggtgggtgag
agggccgtgcaggccaagcacgtccagatggtcagcggggtccgagtggccaccttctgg
ctgtcggcgctgctgtgggacctgctctccttcctcgtgcccagcctggggctgctggtg
gtgttcaaggccttcgacgtgcacgccttcacgcgggatggccacctggcggatgccctg
ctgctgctgctggtctacggctgggccattgtgccccacatgtacctgctcagcttcctc
ttctcgggggccgccatggcctacacgcgcctcaccatcttcaacatcctctccggcatc
gctaccttcctcgtggtcaccatcatgcgcatcccggaggtgaagctggaagagctttcc
agaaccctggaccatgtgttcctggtgctgcccaaccactgcctgggaatggccgtgagc
agcttctacgagaactacgagaccaagaggtactgcacctcctcagaggtggcggcccag
tactgcaagaaatacaagatccagtaccaggagaatttctacgcttggaacgcgcccggc
gtcggccgctttgtggcgtccatggccacctcggggcttgtctccctcgtcctgctcttc
ctcctggagaccgacctgctgtggcggctgcgtgcccgcctctgcaccctccgggggggc
cgcacactgacagaggcatatgcccaagcgtccgtgcttcccgaggaccaggatgtggtg
gaagaaaagaaccgggtcatggcctatggaccgggccccctgccggacacgccgctggtg
gtcaaggagctctccaaggtgtacccacagcggacgcccctcctggccgtgcatgggctc
tgcctggccgtgcacaagggcgagtgcttcgggctgctgggcttcaacggggcgggcaag
agcacgaccttcaagatgctgacgggggaggagaccatcacgtcgggcgacgccttggtc
gggggctacagcgtctgctctgacattgggaaggtgcgccagcggatcggctactgcccc
cagttcgatgcactgctggaccacatgacgggccgggagacgctggtcatgtatgcgcgg
ctgcgaggcctccccgagcgccacatcgcagcatgcgtggagcatacgctccgggcactg
ctcctggaaccacacgccgacaagctggtgcggacctacagcgggggcaacaagcggaag
ctgagcaccggcatcgcccttctgggtgagcccgccgtcatcttcctggacgagccgtcc
acgggcatggaccctgtggcccggcgcctgctctgggacaccgtggcgcgcgcccgcgag
gccggcaaggccattgtcatcacatcccacagcatggaggagtgcgaggccctgtgcacg
cggctggccatcatggcgcatggccagctgcggtgcctgggcagcccacagcacctcaag
agcaggttcggcagcggctacggcctgcgggccaaggtgcggagccacgggcggcaggag
gcgctgcaggagttcaaggccttcgtgcacctgactttcccaggcagcgtcctggaagat
gagcaccaagggatggtccactaccacctgccgggtgaggacctcagctgggccaaggtg
ttcggcaccctggagaaggccaaggagcagtacggcctggacgactactcggtcagccag
atctcgctggagcaggtcttcctcagcttcgcgcacctgcagccgcccctggaggccgag
ggcccctga
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integrated database retrieval system
