Sorex fumeus (smoky shrew): 130042947
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Entry
130042947 CDS
T10594
Symbol
TRAF7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130042947 (TRAF7)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130042947 (TRAF7)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130042947 (TRAF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_EML
WDR55
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
NBCH_WD40
WD40_like
Beta-prop_SPT8
zf-RING_UBOX
zf-C3HC4
Beta-prop_DCAF4
zf-C3HC4_2
Sina_ZnF
zf-TRAF
Beta-prop_IFT140_2nd
PKcGMP_CC
zf-C3HC4_4
Beta-prop_EIPR1
Beta-prop_Nup120_160
zf-C3HC4_3
zf-RING_5
WD40_MABP1-WDR62_1st
Crescentin
Filament
WDR90_beta-prop_4th
DUF641
U-box
DUF16
DUF4164
Motif
Other DBs
NCBI-GeneID:
130042947
NCBI-ProteinID:
XP_055991202
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
METTFGPAFSTVTTISKADGGTTYKQHRRTPSSSSTLTFPPRDEDDGMPPISTPRRSDSA
ISVRSLHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLCCQLCCGVFKDPVITTCGHT
FCRRCALKSEKCPVDNAKLTVVVNNIAVAEQIGELFIHCRHGCRSVGSGKPPVFEVDPRG
CPFTIKLSARKDHEGSCDYRPVRCPNNPSCPPLLKMNLEAHLKECEHIKCPHSKYGCTFI
GNQDTYETHLETCRFEGLKEFLQQTDDRFHELHVALAQKDQEIAFLRSMLGKLSEKIDQL
EKNLELKFDVLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCK
GTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQG
CKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSAHNMLFSGSLKAIKVWDIVGTE
LKLKKELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVLQTSGGSVYSIAVTN
HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWS
MDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVWTC
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaaactacctttgggccggccttctccacggtcaccaccatcagcaaagccgacggc
ggcaccacatacaagcagcaccggcgcaccccgtcctcctctagcacgttgaccttccca
ccacgggacgaggacgacggcatgccccccatcagcaccccgcgccgctccgactcggcc
atctctgtccgctctctgcactcggagtccagcatgtccctgcgctccactttttcactg
cccgaggaggaggaggagccggagccgctggtgttcgccgagcagccctcggtgaagctg
tgctgccagctgtgctgtggtgtgttcaaggaccccgtgatcaccacatgcgggcacacg
ttctgtcggagatgtgccttgaagtcagagaagtgccccgtggacaacgccaagctgacc
gtggtggtgaacaacatcgcagtggctgagcagattggggagctcttcatccactgcagg
cacgggtgccgcagcgttggcagtggcaagccccctgtcttcgaagtggacccccggggc
tgccccttcaccatcaagctcagtgcccggaaggaccatgagggcagctgtgactaccgg
cccgtgcggtgccccaacaaccccagctgcccgcccctgctcaaaatgaacctggaggcc
cacctcaaggagtgcgagcacatcaagtgcccccactccaagtatgggtgcacgttcatc
gggaaccaggacacgtacgagacgcatctagagacgtgccgcttcgagggcctgaaggag
ttcctgcagcagacggacgaccgcttccacgagctgcatgtggcgctggcgcagaaggac
caggagatcgccttcctgcgctccatgctgggcaagctctccgagaagatcgaccagctg
gagaagaacctggagctcaagttcgacgtgctggatgagaaccagagcaagctcagcgag
gacctcatggagttccggagggacgcgtccatgctgaacgatgagctgtcccacatcaac
gcgaggctgaacatgggcatcctgggctcctacgaccctcagcagatcttcaaatgcaag
ggcactttcgtgggccaccaggggcccgtgtggtgtctctgcgtctactccatgggggac
ctgctcttcagcggctcctctgacaagaccatcaaggtatgggacacctgcaccacctac
aagtgccagaagacactagagggccacgacggcatcgtgctggcactctgcatccagggg
tgcaagctgtacagcggctccgcggactgcaccatcatcgtgtgggacatccagaacctg
cagaaggtgaacaccatccgggcacacgacaaccccgtgtgcacgctggtctcggcccac
aacatgctcttcagcggctccctgaaggccatcaaggtctgggacattgtgggcaccgag
ctgaagctgaagaaggagctgaccggcctcaaccactgggtgcgggccctggtggccgcc
cagagctacctgtacagcggctcctaccagacaatcaagatctgggacatccgcaccctg
gactgcatccacgtcctgcagacgtctggcggcagcgtgtactccatcgcggtgaccaat
catcacatcgtgtgtggcacctacgagaacctcatccacgtgtgggacatcgagtccaag
gagcaggtgaggaccctgacgggccacgtgggcaccgtgtacgccctggcggtcatctcc
acccctgaccagaccaaagtcttcagtgcatcctatgaccggtctctcagggtgtggagc
atggacaacatgatctgcacgcagactttgctgcggcaccagggcagcgtgacagcgctg
gctgtgtcacgaggccgtctcttttcgggagcggtggacagcactgtgaaggtctggact
tgctga
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integrated database retrieval system
