Sorex fumeus (smoky shrew): 130043024
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Entry
130043024 CDS
T10594
Symbol
MGRN1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04120
Ubiquitin mediated proteolysis
sfum04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130043024 (MGRN1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130043024 (MGRN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130043024 (MGRN1)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130043024 (MGRN1)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130043024 (MGRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
130043024
NCBI-ProteinID:
XP_055991305
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDGGDSPGEDSDRPRALYSL
EFTFDADARVAITVYCQAAEEFLNGSAAYSPRSPALRSETVHYKRGAGQHFSLPSFKIDF
SEWKDDELNFDLDRGIFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQK
QIVDRVSYLLQEIYGIENKNSQETKPADEENSDNSSECVVCLSDLRDTLILPCRHLCLCN
SCADTLRYQASSCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSMDHEEHACPLKK
SKSHPASLASKKPKRETSPDSVPPGYEPISLLEALNGLRAASPALPSAPLYEEVTSSAGS
DGLSQASCPRAGMERLQMAPRTKSPDSTLHSPPSPTHLDEEPLSQDSPLPPVLSSSPESF
VMEEPEETTSPKQGSRAPSIENVLQDSPEQRGCGAPADICLPGWPTSLDTPRSLRSTSAP
RPPPPGGSSPEPGTTELTPL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagccgccgcatcgcgggcgtggaggacatcgacatccaggccaac
tcggcctaccgctacccccccaagtccggaaactacttcgcctcgcactttttcatgggg
ggcgagaagttcgacacccctcaccctgaagggtacctcttcggagagaacatggacctg
aacttcctgggcagccgccccgtccagtttccttatgtcacacccgctccccacgagccc
gtgaagacgctgaggagcctggtgaacatccgcaaagactccctccggctcgtgaggtac
aaggacggtggcgacagccccggcgaggacagtgaccggccacgggcactctacagcctg
gagttcaccttcgatgcggacgcgcgcgtggccatcactgtgtactgccaggcggccgag
gagttcctcaacggctccgccgcgtacagcccccgaagccccgccctgcggtcagagacc
gtccactacaaacgcggcgctggccagcacttctccctgccctccttcaagatcgacttc
tcggagtggaaggacgacgagttgaactttgacctggaccggggcatatttccagtggtc
atccaggccgtggtggatgaaggcgatgtggtggaggtaactggccacgcccacgtgctc
ttggccgcctttgaaaagcacgtggatggcagcttctcggtgaagcctttgaagcagaag
cagatcgtggaccgggtgagctacctgctgcaggagatctatggcatcgagaacaagaac
agccaggagacgaagcccgcggacgaggagaacagcgacaacagcagcgagtgcgtggtg
tgcctgtcggacctccgggacacactcatcctgccgtgccgccacctctgcctctgcaac
tcctgcgccgacacgctgcgctaccaggccagcagctgccccatctgccgcctgcccttc
cgggcacttctgcagatccgggcagtgcggaagaagcccggagcactgtcccccgtctcc
ttcagccctgtgctggcccagagcatggatcatgaggaacacgcgtgtccccttaaaaaa
tcaaagtcgcaccctgcctccctggccagcaagaaacctaaaagggaaacaagccctgac
agcgtcccgcctggctatgagcccatctccctgcttgaggcgctcaacggcctcagggcc
gcatccccggccctgccgtcagcccccctctatgaggaggtcacttcctcggctggctcg
gatggcctgtcccaggccagctgtccccgcgcagggatggagcgcctgcagatggcgcca
cggaccaagtccccggacagcaccctgcactccccgccgtcccccacccacctggacgag
gagccactctctcaggactcgccgctgccccccgtgctcagcagctccccagagagtttc
gtgatggaggaacctgaggagacgacgtcccccaagcaaggaagccgagctccctccata
gagaacgtgctgcaggacagcccagaacagcgaggctgcggcgcccccgccgacatctgc
ctgccaggatggcccacctccctggacacaccccgcagccttcgcagcaccagcgccccc
aggccccccccgccgggtggctccagtcctgagccggggaccaccgagctgacccccctc
tga
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