Sorex fumeus (smoky shrew): 130043061
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Entry
130043061 CDS
T10594
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D
KO
K06842
semaphorin 6
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
130043061 (SEMA6D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
130043061
NCBI-ProteinID:
XP_055991332
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MRFFLLCAYMLLLMISQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYETSIEFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRIRYR
LTAIAVDHTAGPHQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCNAE
NEEDRKVISLQLDKDHHALYVAFSSCVVRIPLSRCERYGSCKKSCIASRDPYCGWLSQET
CGRVTPGTLAGGYEQDPEYGNTAHLGDCHEILPTSATPDYKIFGGPTSDMEVSSSSVTTM
ASIPEITPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGIPKGVRWEVQSGESNQMVH
MNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGL
FDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVL
HQKTLQAMKSHSDKTHSHGASRKETSQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTS
FSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLNDPNSNPKAIMGDI
QMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLER
QRGYHKNSSQRHSISALPKNLSSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGAPVSVH
LQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRPLNKYTY
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcttcctgctttgtgcctacatgctgctcctgatgatttcccaactgagggca
gtcagctttcctgaagatgatgaaccccttaataccgtagattatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaatgaatcacagcacaggctggactttcag
ctgatgttgaaaattcgagacacactctatattgctggcagggatcaagtttatacagtc
aacttaaatgaaattcccaaaacagaagtgatcccaagcaagaaactgacatggcgatcc
agacaacaggatcgagaaaactgtgcaatgaaaggcaaacacaaagatgaatgccacaac
tttattaaagtatttgtcccaagaaatgatgagatggtttttgtgtgtggtaccaatgcc
tttaatcccatgtgtagatactatagattgagtaccttagagtatgatggggaagaaatt
agtggcctggcaagatgcccatttgatgccagacaaaccaatgttgccctttttgctgat
gggaagttgtactctgccacagtagctgacttcttggctagtgatgcagttatttatcga
agcatgggtgatggatctgctctgcgcacaataaaatatgattccaaatggataaaagaa
ccgcactttcttcatgccatagaatatggaaactatgtctatttcttcttccgagaaatt
gctgtagaacataataatttaggcaaggctgtatattcccgtgttgcccgcatatgtaaa
aacgacatggggggctcccagcgggtcctggagaaacactggacttcctttctgaaggca
cggctgaactgttctgtccctggagattcctttttctactttgatgttctgcagtctatc
acagacataatacaaatcaatggcatccccactgtggtcggggtgtttaccacacagctc
aacagcattcctggctctgcagtctgtgcatttagcatggatgacattgaaaaagtattc
aaaggccggtttaaagaacagaaaactccagattctgtttggacagcagtccccgaagac
aaagtaccaaagccaaggcctggttgctgtgccaagcatggccttgctgaagcttatgaa
acctctattgagttcccggatgaaaccctgtctttcatcaaatcgcatcccctgatggac
tcagctgtaccccccattgctgatgagccctggttcacaaagaccaggatcaggtacaga
ctcacagccattgcggtggaccatacagcaggaccccaccagaactacacagtcatcttc
gttggctcggaggctggtgtggtacttaaagttttggcaaagaccagtcctttttctttg
aatgacagcgtattactggaagagattgaagcctacaaccatgcaaagtgtaatgccgag
aacgaggaggacagaaaagtcatctcattacagttggataaagaccatcatgccctgtac
gtggccttctctagctgcgtagttcgcatccccctcagtcgctgtgagcgttatggatcg
tgtaaaaagtcttgtattgcttctcgggacccgtactgtggctggttaagccaggagacc
tgtgggagggtgacgccagggacactagctggagggtatgagcaagaccccgagtatggc
aacaccgcacacctaggggattgccatgaaattttgcctacttcagctacaccagattac
aaaatatttggcggtccaacatctgacatggaggtatcttcatcttctgttaccacaatg
gcaagtatcccagaaatcacacctaaggtgattgatacctggaggcctaaactgacgagt
tcccggaaatttgtagttcaagatgacccaaacacttctgattttactgatcctttatca
ggtatcccaaagggtgtccgatgggaagttcagtctggagaatccaaccaaatggtccac
atgaatgtcctcatcacctgtgtctttgccgcttttgttttgggtgcattcattgcaggt
gtagcagtgtattgctatcgtgacatgtttgttcggaaaaacagaaagatccataaggat
gcagaatcagcccagtcatgcacagactccagtggaagttttgccaaacttaatggtctc
tttgacagtccagtcaaggaatatcaacagaatattgattcccccaagttgtatagtaac
ctgctgaccagtcggaaggagttgccacccaatggagatacgaagtccatggtgatggac
catcgaggccaacctcctgagctggctgctctccccacacccgagtccacacctgtgctt
caccagaagacacttcaggccatgaagagccactctgacaagacccacagccatggggct
tcaaggaaagaaacctcccagttcttcccttctagtcctccaccccattccccattaagt
cacggacacatccccagtgccattgttcttcctaatgctacacatgactacaacacatct
ttctcaaactcaaatgctcacaaagccgaaaagaagcttcagaatattgaccatcctctt
acaaagtcatccagtaagagagaccaccggcgttctgtggattccagaaataccctcaac
gatctcctgaaacatctcaatgaccccaatagcaaccccaaagccatcatgggagatatt
caaatggcccaccaaaccttaatgttggatcctgtggggcctatgtctgaggtccctccc
aaagtccccaaccgggaggcttccctctactctcctccttcaactctacccagaaatagc
ccgaccaagcgagtggatgtccccaccactcctggagtcccaatgacttctctggaaaga
caaaggggatatcataaaaattcctcccaaaggcactcaatatctgcgctgcctaaaaac
ttaagctcacccaatggggtgttgttatctagacagcctagtatgaaccgtggcgggtac
atgcccacccccacaggggctaaggtggactatattcagggagcaccagtgagtgttcat
ctgcagccttccctctctagacagagcagctacaccagtaacggcactcttcctcggacg
ggactaaagaggacaccgtccttaaaacccgatgtgccgccaaagccttcatttgttcct
caaaccacatctgtcagaccactgaacaagtatacatactag
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