Sorex fumeus (smoky shrew): 130043085
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Entry
130043085 CDS
T10594
Symbol
CHRNA5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130043085 (CHRNA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfum04040
]
130043085 (CHRNA5)
Ion channels [BR:
sfum04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130043085 (CHRNA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
130043085
NCBI-ProteinID:
XP_055991361
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MAARGSGIALRLQLLFQLVAGLWGPAGAGRGAARGLAEPSSIAKHEDNLFKDLFQDYEKW
VRPVEHLSDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWKDVKLRWNPDDYGGIKVI
RVPSNSLWIPDIVLFDNADGRFEGASTKTVVRYDGSVTWTPPANYKSSCTIDVTFFPFDL
QNCSMKFGSWTYDGSQVDILLEDREVDKRDFFDNGEWEIVSATGSKGNRSDSCCWYPYIT
YSFVIKRLPLFYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEE
IIPSSSKVIPLIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHSAMAPWVRRIFLHQLP
KLLCMRSHVDRYFTQEEEAASPSAPSASQNTLEAALDSIRYITRHVVKENEVREVVEDWK
FIAQVLDRMFLWIFLLVSIIGSLGLFVPVIYKWANIIVPVHIGNANM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcgggggtcggggatcgcgctgcgcctccagctcctcttccagctggtggcc
gggctctggggtccggcgggcgcggggcgcggcgcggccagaggattagctgaaccatcc
tctattgcaaaacatgaagataatttgtttaaggatttatttcaagactatgaaaaatgg
gttcgtcctgtggaacacctgagtgataaaattaaaataaagtttggtcttgcaatatct
cagttggtggatgtggatgagaaaaatcaattgatgacaacaaatgtctggttgaaacag
gaatggaaagacgtaaaattaagatggaaccctgatgactatggtggaataaaagttata
cgtgtcccttccaactccctctggatccccgacattgttttgtttgataatgcagatggg
cgtttcgaaggggccagtacgaaaacagtcgtcaggtatgatggcagcgtcacctggact
ccaccagcaaactacaaaagctcctgcaccatagatgtcacgtttttcccctttgacctc
cagaactgttccatgaaattcggttcgtggacgtacgatggctcccaggtcgacatcctt
ttagaggaccgcgaggtggacaagagagatttttttgataacggagaatgggaaatagtg
agtgccaccgggagcaaagggaacagaagtgacagctgctgctggtacccttatatcacg
tactcgtttgtgatcaagcgcctgcctctcttttataccttgtttcttatcataccctgt
atcgggctctcatttttaactgtacttgtcttctatcttccttccaatgaaggtgaaaag
atttctctctgcacttccgtccttgtctccttgaccgtcttccttttggttattgaagag
attattccctcctcttccaaagtaatccctctgattggagagtatctagtattcaccatg
atttttgtgaccctgtcaattatggtgactgtctttgccatcaacatccatcatcgctcc
tcctcgacacacagtgccatggcgccctgggtccgccggatatttctccaccagcttcca
aagctgctgtgcatgagaagtcacgtagatagatatttcactcaggaggaggaggctgca
agccccagcgccccatcggcttctcagaacacattggaggcggcgctggattcgattcgt
tacatcacaagacatgtggtgaaggagaatgaagtgcgtgaggttgttgaagattggaaa
ttcatagcccaggttcttgatcggatgtttctgtggatctttcttctggtttcaattata
ggatctcttgggctctttgttcctgtgatttacaagtgggcaaatataatagtaccagtt
catattggaaatgcaaacatgtaa
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