Sorex fumeus (smoky shrew): 130043162
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Entry
130043162 CDS
T10594
Symbol
CD44
Name
(RefSeq) CD44 antigen
KO
K06256
CD44 antigen
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04512
ECM-receptor interaction
sfum04640
Hematopoietic cell lineage
sfum05169
Epstein-Barr virus infection
sfum05205
Proteoglycans in cancer
sfum05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130043162 (CD44)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
130043162 (CD44)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
130043162 (CD44)
05205 Proteoglycans in cancer
130043162 (CD44)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
130043162 (CD44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfum04147
]
130043162 (CD44)
04090 CD molecules [BR:
sfum04090
]
130043162 (CD44)
00535 Proteoglycans [BR:
sfum00535
]
130043162 (CD44)
00536 Glycosaminoglycan binding proteins [BR:
sfum00536
]
130043162 (CD44)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130043162 (CD44)
Exosomal proteins of other body fluids (saliva and urine)
130043162 (CD44)
Exosomal proteins of colorectal cancer cells
130043162 (CD44)
Exosomal proteins of bladder cancer cells
130043162 (CD44)
CD molecules [BR:
sfum04090
]
Proteins
130043162 (CD44)
Proteoglycans [BR:
sfum00535
]
Cell surface proteoglycans
Others
130043162 (CD44)
Glycosaminoglycan binding proteins [BR:
sfum00536
]
Hyaluronan
Cell surface receptors
130043162 (CD44)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Motif
Other DBs
NCBI-GeneID:
130043162
NCBI-ProteinID:
XP_055991437
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MDQFWWRAAWGLCLVHLSLAQIELNVTCRYSGVFHVEKNGRYSISRTEAADLCTAFNSTL
PTMAQMEQALKVGFETCRYGFIQGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCYN
ASAPVGEDCASVTNLTNAFEGQVSITIVNRDGTRYMQKGEYRTNPNDINPSSAPDEDISS
GSSSERSTSGGYIFHTQLPTTHPTQDQDGPWVSHYPENTQAMTLMGTSDSTSKTTAKRQG
AQDWFSWWFQPTEDRNHLHTTTNMAGANSNITLAGRDPIEENEDERDKHPSYSGSGIDDD
EDFVSSTISTTTRLFNYPNQKPDWTHWNPDQSNSDVLPQTTTRMNDVNRSGTSASGENWT
QETHPPLIHHEHHDEEDTQHSTSTTQETPSSATEETATHTEQFENGWPGEYPQMPKEDSH
STPGTTAASAHDNHPDQRMTTQNPEDSSWTDFFDPISHPMGQGHQTENSMDMDSSHSTTL
QPSADPNVNLVEDLNRKETLSITTQQNPAQSFSTSHSVLEEDKDYQVTSAPTFSTNNDGK
DRWEGENHPQDSTTSLEGYTSHSSDTKEHGTLVPVSRAETVAPEVTEVSIVGDVNSNVDG
SVSGDHDDSSSDYDSHGKSHTTDGSQSAGHASGSQGGDVNPTSSPKRKPQIPEWLIILAS
LLALALILAVCIAVNSRRRCGQKKKLVINNGNGAVEDRKPSGLNGEASKSQEMVHLVNKE
PSETPDQFMTADETRNLQNVDMKIGV
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggaccagttttggtggcgcgccgcgtggggactctgcctcgtgcatctgagcctggca
cagatcgaactgaacgtcacctgccggtattcaggcgtattccacgtggagaagaatggg
cgctacagcatctcgcggaccgaggctgctgacctctgcacggctttcaacagcaccctg
cccacgatggcccagatggagcaagccctgaaagtcgggtttgagacctgcaggtacggg
ttcatacaagggcatgtagtgattccccggattcaccccaactccatctgtgctgccaac
aacacaggagtgtacatcctcacatccaatacctcccagtatgacacatattgctacaat
gcttcagctccagttggagaagattgtgcttcagtcacaaacttgacgaatgcctttgaa
ggacaagtctccataactattgtaaaccgtgatggcacccgctatatgcagaaaggagaa
tatagaactaaccctaatgacatcaaccccagcagtgctcctgatgaagacataagcagt
ggctcctccagcgaaagaagcacttcaggaggttacatattccacacccagctgccaact
acacacccaactcaagaccaagacggaccctgggtgtctcattacccagagaacacccag
gctatgactttgatgggcactagtgattcaacttccaaaacaacagccaagagacaaggc
gcccaagattggttttcttggtggtttcagcccacagaggacaggaatcatcttcacaca
acaacaaatatggctggtgcaaattcaaatatcaccctagcaggccgggaccccattgaa
gaaaatgaagatgaaagagataaacaccccagttattccggatcaggcattgatgatgat
gaagattttgtctccagtaccatttcaaccacaacacggctttttaactacccaaatcag
aaaccagattggactcactggaacccagatcaatcaaattcagatgtattacctcagaca
accacaaggatgaatgatgttaacagaagtggtaccagtgcttctggagaaaactggacc
caggaaacacatccacctctcattcaccatgagcatcatgatgaagaggatacccagcat
tctacaagcacaacccaagaaacccctagtagtgctacggaggaaacagctacccacaca
gagcagtttgagaatggatggcccggggagtatccccagatgccaaaagaagactctcac
tcaacaccagggacaactgcagcctcagcccatgacaaccacccagatcaaagaatgaca
acacagaatccagaggatagttcctggacagatttcttcgacccaatctcacatccaatg
ggacaaggtcatcaaactgaaaacagcatggatatggactccagtcatagtacaacgctt
caaccttctgcagatccaaatgtaaatttggtggaagatttaaacaggaaagaaacactt
tccatcacaactcagcagaatcctgctcagagcttctccacatcacatagtgtcttggaa
gaagataaagactatcaagtgacttctgctccaacatttagcactaataatgatggtaaa
gatagatgggaaggtgaaaatcatcctcaagattcaactacttctctggaaggttacacg
tctcattcctcagacacaaaggaacacgggacccttgtcccagtgagccgtgctgagact
gtggcccctgaagtgactgaagttagtattgttggagatgtcaactctaatgttgatggt
tctgtatcaggggatcatgacgactcatcctctgactatgactcccatggcaagtcccac
actactgatggatctcagtcagctggacatgcaagtgggagtcaaggaggtgatgtaaac
ccaacctcaagtcctaagagaaagcctcaaattccagaatggctgataatcttggcatcc
ctcttggccctggctttgattctcgcagtttgcattgctgtcaacagtcgaagaaggtgt
ggacaaaagaagaagttggtgattaacaatggcaacggagccgtggaggataggaaacca
agtggactcaatggagaagccagcaagtctcaagagatggtgcacttggtgaacaaggaa
ccgtcagagactccagaccagtttatgacagccgatgagacacggaatctgcagaatgtg
gatatgaagattggggtgtaa
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integrated database retrieval system
