Sorex fumeus (smoky shrew): 130043290
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Entry
130043290 CDS
T10594
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130043290 (NPAS1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130043290 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
130043290
NCBI-ProteinID:
XP_055991520
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MEPPYPGGGGGGHSKGGGGRGGSVPWDFLPGLGVKAPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFASLGTPPWGLRAAAPPAGLA
PGRRGPVALITEVFEQHLGGHILQSLDGFVFALSQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAATPGPPTPPSVPSSSSSSSNSSSSLADTLEIEASPATA
APEAQPQERSFFVRMKSTLTKRGLHLKASGYKVIHVTGRVRARALGLVALGHTLPPAPLA
ELPLHGHTIVFRLSLALTILACESRISDHMDLGPSELVGRSCYQFVHGQDAARIRQSHVD
LLDKGQVATGYYRWLQRAGGFVWLQSVATVAVNGKSPAERHVLWVSHVLSQAEGGQTPLD
AFQLPANVVREDTPSPEPEPLEPPRKGKLAAPQDQAPAPVPELQSKRIKAEPSPGDTRGP
EDSSEEELPGALALLRPESTSVIRALKQDLVQPWGPPGDAAPSLLHAGFLSPVVRGLCTP
GTIRYGPAELGLMYPHLQRLGPGPVLPEAFYPTLALPYAGPPGTRVQRKGD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggagcccccctaccccggcggcggcggcggcggccactccaaaggcgggggaggtcgc
ggcggcagcgtcccgtgggactttctgccgggactgggtgtcaaggccccgccgggaccc
tgcctgcaggcgcagcgcaaggagaaatcccggaacgcggcgcgctcgcggcgcgggaaa
gaaaacctggaattcttcgagctggccaagttgctcccgctgcctggagccatttccagc
cagctggacaaggcgtccatcgtgcgcctcagtgtcacctacctccgactgcgccgcttc
gcttcgctcgggacgccgccctggggactgcgagccgcggcgccccccgcgggtctcgcc
ccaggccgccgcggtcccgtggcgctgattaccgaagtcttcgagcagcacctgggcggc
cacatcctgcagtccctggacggcttcgtgttcgccctgagccaggaagggaagtttctc
tatatctcagagaccgtctccatttacctgggcctctcacaggtggagctgacgggcagc
agcgtcttcgattacatccacccgggagaccactcggaggtgctggagcaactggggctg
cgggcagcgacccccgggcctcccaccccgccctccgtcccctcttcctcctcctcctct
tccaactcttcctcctcgctggcggacacccttgagatcgaggccagccccgctacagcg
gcgcccgaggcccagccccaggagcgttcgtttttcgtccgcatgaaatccacactcacc
aaaaggggtctgcacctcaaggcatcagggtacaaggtcatccatgtcacaggtcgtgtt
cgggcacgcgcactgggtctggtggcccttgggcacacgctgccgcccgccccgctggca
gagctgccactgcatgggcacacgattgtcttccgcctcagcctggcgctcaccatcctt
gcctgtgagagcagaatcagcgaccacatggatctggggccctcggagcttgtgggccgc
agctgctaccagtttgtccacggacaagatgcagccaggatccgccagagccacgtggac
ttgctggacaagggccaagtggccaccggctactaccgctggctgcagcgagcaggcggc
tttgtatggctgcagtccgtggccaccgtggctgtgaacgggaagagcccggcggaacgc
cacgtgctgtgggttagccacgtgctcagccaagccgaaggtggccagacacccctggat
gccttccagcttccagccaatgtggtccgtgaggacacgcctagcccagagcctgagccc
ctcgagcctccccggaaagggaaactggcagccccccaggaccaggccccggcccccgtc
cctgagctgcagagcaagcgcatcaaagccgagcccagccctggggacacgcggggccca
gaggacagcagtgaggaggagctgcccggagccctggccttgcttcggcctgagtccacg
tcggtcatccgggcactgaagcaggacctggtgcagccgtgggggcctcctggggacgcc
gccccatccctgctccacgccggcttcctgtccccggtggtgcggggcctgtgtacaccg
ggcaccatccgctatggccccgcggagctaggcctcatgtacccacacctacagcggctg
gggcccgggccagtgctccctgaggccttctaccccactctggccctgccctatgccggg
cctccaggcaccagggtgcagcggaagggggactga
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