Sorex fumeus (smoky shrew): 130043462
Help
Entry
130043462 CDS
T10594
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130043462 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130043462 (CNOT3)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130043462 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130043462 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
130043462
NCBI-ProteinID:
XP_055991744
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSSQHPQSPAVPPSYPSGPPPAASALNTAPGNNGAATPAVPPGALGPKASP
APSHNSSTPAPYAQAVAPPAPSGPSTAQPRPPSVQAGGGSSGGGGGGGGSGGGGTGKQNG
ATSYSSVVADSPAEAALNSSGGSSASSQALGPSVPHNPPPSTSKEPSAAAPSGAGGIAPG
SGNNTGGPSLLVPLPVNPPSSPTPSFSEAKTPSALLNGPPQFSSTPEIKAPEPLSSLKSM
AERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVCPLGPVP
LTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQTPPPHSDTVEFYQRL
STETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIY
FDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagatagatcgctgcctcaagaaggtgtccgag
ggtgtggagcagtttgaagatatctggcagaagctccacaatgcagccaatgcgaaccag
aaagagaagtatgaggctgatctaaagaaggagattaagaagcttcagcggctgagggac
cagatcaagacatgggtagcatccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcatcgagacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcttatagcaaggagggcctgggcctggcccagaaggtggaccctgcccagaaggag
aaggaggaggttggccagtggctcacgaacaccatcgacaccctgaacatgcaggtggac
cagtttgagagcgaagtggagtcgttgtccgtgcaaacgcgcaagaagaagggtgataag
gatcagaagcaggatcggatcgagggcctgaagcggcacatcgagaagcaccgctaccac
gtgcgcatgcttgagaccatcctgcgcatgctggacaatgactccatcctggtggatgcc
atccgcaagatcaaggatgacgttgagtactacgttgactcatcacaggaccccgacttc
gaggagaatgagttcctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccacccagccacagtcatatggaggatgagatcttcaaccagtcgagcagc
acgcccacctcaaccacctccagttccccgatcccacccagcccggccaactgcactacg
gagaactctgaagatgacaagaagaggggacgctcaacggacagtgaagtcagccagtct
ccagccaagaacggctccaagcccgtccatagcagccagcaccctcagtcaccggctgtg
ccccccagctacccttccggtcccccacctgccgcctctgctctgaacaccgcccctggc
aacaacggggcagctaccccagcagtgcctccgggtgccctgggccctaaggccagtcca
gctcccagccacaactcaagcacccctgccccctacgcccaggctgtggcaccgcctgcc
cccagtggacccagcacagcccagccccggccccccagtgtgcaggccggagggggcagc
agcggcggcggcggcggtggcggtggtagtggaggcgggggcactggcaagcagaacggc
gccaccagctacagctccgtggtggcggacagcccggcagaggctgctctcaacagcagt
gggggcagcagtgccagcagccaggctctgggcccctctgtcccccacaacccccctcct
agcacctcgaaggaacccagtgcggcagccccatcaggggctgggggcattgccccaggc
tcagggaacaacacggggggccccagcctcctggtgccacttcctgtgaacccacccagc
tccccgacacccagcttcagtgaggccaagacacccagtgccctgctcaacggccccccg
cagttcagctccaccccggagatcaaggcccctgagcctctgagttctctaaagtccatg
gcagagcgcgcagccatcagctctggcattgaggaccccgtgccaacgctgcacctgact
gagcgagacatcatcctcagcagcacctctgcgcctcccgcctctgcacagccgcccctc
cagctgtcggaggtgaatatcccgctgtccctgggtgtgtgtccactggggcccgtgccc
ctcaccaaggagcagctgtaccagcaggccatggaggaggccgcctggcaccacatgcca
cacccctcggactctgagcgcatccggcagtacctaccccggaacccctgtccgacgccc
ccctaccaccaccagacgccacccccacactcagacaccgtggagttctaccagcgactg
tccacagagacgctcttcttcatcttctactatctggagggcactaaggcccagtacctg
gcggccaaggctctgaagaagcagtcgtggcgcttccacaccaagtacatgatgtggttc
cagaggcatgaggagcccaagaccatcacggatgagttcgagcagggcacctacatctac
tttgactacgagaagtggggccagcggaagaaagaaggcttcacctttgaataccgctac
ctagaggaccgggacctccagtga
DBGET
integrated database retrieval system
