Sorex fumeus (smoky shrew): 130043514
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Entry
130043514 CDS
T10594
Symbol
AARS1
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130043514 (AARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfum01007
]
130043514 (AARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfum03016
]
130043514 (AARS1)
Enzymes [BR:
sfum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
130043514 (AARS1)
Amino acid related enzymes [BR:
sfum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
130043514 (AARS1)
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130043514 (AARS1)
Prokaryotic type
130043514 (AARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
BAR
ARM_ECM29_C
Med11
FadA
Motif
Other DBs
NCBI-GeneID:
130043514
NCBI-ProteinID:
XP_055991829
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MDSTLTASEIRQRFIDFFKRHEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPS
HPMAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALE
LLTQEFGIPVERLYVTYFGGDESAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGD
TGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGVLKPLPKKSIDT
GMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGADDADGIDMAYRVLAD
HARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDA
FPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGF
PVDLTGLIAEEKGMLVDMEGFEEERKLAQLKSQGKGAGGEDLIMLDIYAIEELREKGLQA
TDDSPKYNYHSDSSGSYAFESTVATVLALRRDKMFVDEVSTGQECGVVLDKTCFYAEQGG
QIYDEGYLVKLEDSSEDKTEFTVKNTQVRGGYVLHVGTIYGSLQVGDRVRLFIDEPRRRP
VMSNHTATHILNFALRSVLGEADQRGSLVAPDRLRFDFTAKGAMSTEQIKKAEEIANGMI
EAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSKLLDDPSGPAGSLTSV
EFCGGTHLQNSSHAGAFVIVNEEAIAKGIRRIVGVTGAEAQKALRKAESLKNSLSDMEAK
VKAQTAPNKDVQKEIADLGEALATAVIPQWQKDEFREHLKSLKKVMDDLDRASKADVQKR
VLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDNEAGKIT
CLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQLATSFAQ
LRLGDVKN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggactcgaccctaacagcaagtgaaatccggcagcgattcatcgatttcttcaagaga
catgaacacacctatgttcattcatccgccaccatcccgttggatgatcccactttgctc
tttgccaatgccggcatgaaccagttcaagcctatcttcctgaacactattgatccctct
cacccgatggcaaagctgagcagagctgccaatacccagaaatgcatccgagcaggaggc
aagcacaatgacctggacgacgtgggcaaggatgtgtaccatcacaccttttttgagatg
ttgggctcttggtcttttggagattattttaaggaattggcgtgtaagatggcactggaa
cttctcacccaagagtttggcattcctgtggaaagactctatgttacttactttggtggg
gatgaatcagcgggcttagaaccagacctggagtgcaagcagatctggcaaaatctgggg
ctggatgacagcaaaatccttcccggcaatatgaaggacaacttctgggagatgggtgac
acgggcccctgtggtccctgcagtgagatccactacgaccggattggcggtcgggatgca
gcacatcttgtcaaccaggatgaccccaacgtgttggagatctggaaccttgtcttcatc
cagtataacagggaggccgacggcgtcctgaagcctctccccaagaagagcatcgacacg
ggcatgggcctggagcggctggtgtccgtgctgcagaacaagatgtccaactatgacact
gacctcttcgtcccgtacttcgaagccattcaaaagggcacaggcgcacggccatactca
gggaaagtgggcgctgacgacgcggacgggatcgacatggcctaccgggtgttggctgac
cacgcgcggaccatcaccgtggccctggcggatggcggccggcccgacaacacaggccgg
gggtatgtgttgagacggattctccgccgggcagttcgctactcccatgaaaagctcaac
gccagcagagggttcttcgctaccttagtggacgttgttgtacagtccctgggagatgca
ttccctgagctcaagaaggatccagatatggtgaaggacatcattaatgaagaagaagtg
cagtttctcaagactctgagcagagggcggcgcatcctagaccgaaaaattcagagtctt
ggagacagcaagaccattcccggggacactgcgtggcttctttatgacacttacgggttc
ccagtggacctcacgggactgatcgctgaggagaagggcatgctggtcgatatggagggc
tttgaagaggagaggaaactggcccagctgaaatcccagggcaagggagctggaggagag
gacctcattatgctggacatctatgccattgaagagctccgggaaaagggtctccaggca
acagatgactccccaaagtacaattaccactcggactccagcggtagctacgcatttgag
agcacggtggccacggtgctggccctgcgcagggataagatgttcgtggatgaggtgtcc
acgggccaggagtgtggcgtggtgctggacaagacctgcttctacgctgagcaaggagga
cagatctacgacgaaggctacctggtgaagctggaggacagcagtgaggataaaactgag
ttcacggtgaagaacacacaggtgcgaggcgggtacgtgctgcacgtggggaccatctac
ggcagcctgcaggtgggggaccgcgtccggctgttcatcgatgagccccgccgcagaccc
gtcatgagcaaccacacggccacccacatcctcaacttcgcgctgcgctctgtgctgggg
gaggccgaccagagaggctccctggtcgcgcccgaccgcctgcggttcgacttcacagcc
aagggggccatgtctaccgaacagatcaagaaggccgaggagattgctaacgggatgatt
gaagcagccaagccagtctacacccaggattgtcccctagcagcagcgaaagccatccag
ggcctgcgggctgtgtttgacgagacctatcctgaccccgtgcgtgtcgtctccattggg
gtcccggtgtccaagctgttggatgacccctcgggtcctgctggctccctcacttccgtg
gagttctgtggaggaacgcacctgcagaattcgagccacgcgggcgcttttgtgatcgtg
aatgaagaagctattgccaagggcatccggcggattgtgggcgtcacgggtgcggaagcc
cagaaggccttgcggaaagcagagagcctgaagaattccctctcggacatggaggccaaa
gtcaaggcccagactgcaccgaataaggacgtgcagaaggagatcgcagaccttggtgag
gccctggccaccgcggtgatcccccagtggcagaaggatgaattccgggagcatctcaaa
tccctgaagaaagtcatggatgacctggaccgtgccagcaaagccgacgtccagaaacga
gtgttggagaagacgaagcagctcatcgacagcaaccccaaccagcccctcgtcatcctg
gagatggagagcggcgcttcggccaaggccctgaatgaagcattgaagctcttcaagacg
cattcccctcagacatctgccatgctcttcacggtggacaacgaggccggcaaaatcacg
tgcttgtgtcaagtcccccagaacgcagccaatcggggcctgaaagccagcgagtgggtc
cagcaggtgtccggcctgatggatggcaaagggggtggcaaagatgtgtccgcgcaagcc
acaggcaagaacgtgggctgcctgcaggaggcactgcagctggccacttccttcgcccag
ctccgcttgggagatgtcaagaactga
DBGET
integrated database retrieval system
