Sorex fumeus (smoky shrew): 130043515
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Entry
130043515 CDS
T10594
Symbol
SLC6A5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04082
Neuroactive ligand signaling
sfum04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130043515 (SLC6A5)
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
130043515 (SLC6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfum02000
]
130043515 (SLC6A5)
Transporters [BR:
sfum02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
130043515 (SLC6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
DUF999
Motif
Other DBs
NCBI-GeneID:
130043515
NCBI-ProteinID:
XP_055991834
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MNNPPACSLEAAAAAVPGHHEGPCAPRTSPEQELPATAAAPPPPPPRVPRSASTGAQTFQ
IPDPRACEAERPGVGACKFDSARAPAASAALRDWSEAHGAQGAPPAAGVAGPGNALPCKI
PALRGPDGDANVSVGKGTLERNNTRAVGWVNMSQSTVVLGTDGITSVLPGSAATAASQED
EQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLMMLALAGL
PIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIICYTLFYLFASF
VSVLPWGSCNNPWNTPECKDKSRLLLDSCVVSEHPKIQIKNSTFCMTAYPNLTMVNITSQ
ANRTFVSGSEEYFKYFVLKISAGIEYPGEIRWPLAFCLFLAWVIVYASLAKGIKSSGKVV
YFTATFPYVVLVILLIRGVTLPGAAAGIWYFITPKWEKLTDATVWKDAATQIFFSLSAAW
GGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANERKVNIENVADQG
PGIAFVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLRTHK
PVFTLGCCVCFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVGISYVYGLQRFC
EDIEMMIGFQPNIFWKVCWAFVTPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLGWLML
ACSVIWIPIMFVIKMHLAPGRFIERLKLVCSPQPDWGPFLSQHRGERYKNMLDPLGTSSL
GLKLPVKDLELGTQC
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccccccggcctgcagtctggaggcggcagcagcggcggtgcccggccaccac
gagggcccgtgcgcgcccaggaccagcccagagcaggagctgcccgccaccgccgccgcg
ccgccgccgccgccgcctcgcgtgccaaggtccgcgtccaccggcgcccaaactttccag
atcccggacccccgagcctgcgaggccgagcggcccggagtgggcgcttgcaaattcgac
agcgcccgggcgccggccgcgtcggcggctctgcgggactggagcgaggcgcacggagct
cagggcgctccgcccgccgccggggtggcgggcccgggcaacgcgctgccttgtaagatc
ccggccctgcgcggccccgatggagatgcgaacgtgagtgtgggcaaggggaccctggag
cggaataacacccgggccgtgggctgggtgaatatgagccagagcaccgtggtgctgggc
acggatggaatcacgtcggtgctcccgggcagcgcggccaccgcggcctcccaggaggac
gagcaaggggatgagaataaggcccgagggaactggtccagcaaactggacttcatcctg
tccatggtggggtacgcagtggggctgggcaatgtctggaggtttccctacctggccttc
cagaacgggggaggtgccttcctcatcccctacctgatgatgctggctctggctgggctg
cccatcttcttcctcgaggtctcgctgggtcagtttgccagccaggggccagtgtccgtg
tggaaggccatcccggccctgcagggctgtggtatcgccatgctgatcatctccgtcctg
atagccatctactacaacgtgattatttgctacaccctcttttacctgtttgcctccttt
gtgtctgtactgccctggggctcgtgcaacaacccttggaatacaccagaatgcaaagat
aagagcagacttctgttagattcctgtgttgtcagtgagcaccccaaaatacagatcaag
aactcaactttctgcatgactgcctatcctaacttgacaatggtcaacatcaccagccag
gccaacaggacgttcgtcagtgggagtgaagagtatttcaagtatttcgtgttgaagatt
tctgcgggaattgagtatccaggggaaatccggtggcctctggccttctgcctcttcctg
gcttgggtgatcgtatatgcatccctggccaaaggcatcaagtcatcgggaaaagtggtg
tacttcacggccacgttcccatacgtcgtgctggtcatcctcctcatccgaggggtcacc
ctgcccggagctgctgctgggatctggtacttcatcaccccaaagtgggagaagctcacg
gatgccacggtgtggaaagacgctgccactcaaattttcttctcgctgtctgctgcctgg
ggaggcctcatcactctctcttcctacaacaaatttcacaacaactgctacagggacact
ctcatcgtaacgtgcaccaacagtgccacgagcatctttgctggctttgtcatcttctca
gtgattggattcatggctaatgagcgcaaggtcaacatagagaacgtggccgaccaagga
ccaggcattgcgtttgtggtttacccggaagccttaaccaggctgcccctctctcccttc
tgggccatcatctttttcctgatgctgctcactcttggactggacactatgtttgccacc
attgagaccatagtgacctccatctcagatgagttccccaagtacctccgcacacacaag
ccagtcttcactctgggctgctgcgtttgtttcttcatcatgggctttccaatgatcact
cagggtgggatctacatgtttcagctcgtggacacctatgctgcttcctatgccctcgtc
atcattgccatttttgagctcgtgggaatatcctatgtgtacggcttgcaaaggttctgt
gaagacatagagatgatgattggattccagccaaacattttctggaaagtctgctgggcg
ttcgtcacccccaccattctgacttttatcctgtgcttcagcttttaccagtgggagccc
atgacctacggctcttaccgctaccctaactggtccatggtgcttggatggttgatgctt
gcctgctccgttatctggatcccaatcatgttcgtgatcaaaatgcatttggcccctggc
agatttattgagaggctgaaattggtgtgctcgccgcagcccgactggggtcctttctta
tctcagcaccgtggggagcgttataagaacatgcttgaccccttgggaacctcatcgctg
ggactcaaactgcccgtgaaggatttggaactgggtacccagtgctag
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