Sorex fumeus (smoky shrew): 130043571
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Entry
130043571 CDS
T10594
Symbol
PPFIA3
Name
(RefSeq) liprin-alpha-3 isoform X1
KO
K26226
liprin-alpha
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130043571 (PPFIA3)
Membrane trafficking [BR:
sfum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130043571 (PPFIA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF745
Motif
Other DBs
NCBI-GeneID:
130043571
NCBI-ProteinID:
XP_055991929
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MMCEVMPTISEDGRRGSALGPDEAGGELERLMVTMLTERERLLETLREAQDGLATAQLRL
RELGHEKDSLQRQLSIALPQEFAALTKELNLCREQLLEREEEIAELKAERNNTRLLLEHL
ECLVSRHERSLRMTVVKRQAQSPGGVSSEVEVLKALKSLFEHHKALDEKVRERLRMALER
VAVLEEELELSNQETLNLREQLSRRRSGLEEPGKEGDGQSLANGLGPSGDSSRRTAELEE
TMERQRAEVCQLRERLAVLCRQMSQLEEELGTAHRELGKAEEANSKLQRDLKEALAQRED
MEERITTLEKRYLSAQREATSLHDANDKLENELASKESLYRQSEEKSRQLAEWLDDAKQK
LQQTLQKAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQLEAQLEEKNQELQRARQRE
KMNDDHNKRLSETVDKLLSESNERLQLHLKERMGALEEKNSLSEEIANMKKLQDELLLNK
EQLLAEMERMQMEIDQLRGRPPSYSRSLPGSALELRYSQAPTLPSGAHLDPYGAGSGRAG
KRGRWSGVKDEASKDWERAAPEGSIPPPFPGELDGSDEEEAEGVFGAELLSPSGQADVQT
LAIMLQEQLEAINKEIKLIQEEKETTEQRAEELESRVSGSGLDSLGRYRSSCSLPPSLTT
STLASPSPPSSGHSTPRLAPPSPAREGTDKTNHVPKEDTGAPRGEGPAIPGDTPPPTPRS
ARLERMTQALALQAGSLEDGGPSRGSEGAPDSLHKAPKKKSIKSSIGRLFGKKEKGRMVA
PGRDSPSLAGTPSDETLATDPLGLSKLTGPGDKDRRNKRKHELLEEACRQGLPFAAWDGP
TVVSWLELWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEM
VSLTSPSAPASSRTSTGNVWMTHEEMESLTATTKPETKEISWEQILAYGDMNHEWVGNDW
LPSLGLPQYRSYFMESLVDARMLDHLNKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDR
KDLERRREESQTQIRDVMVWSNERVMGWVSGLGLKEFATNLTESGVHGALLALDETFDYS
DLALLLQIPTQNAQARQLLEKEFSNLISLGTDRRLDEDSAKSFSRSPSWRKMFREKDLRG
VTPDSAEMLPPNFRSAAAGALGSPGLPLRKLQPEGQSSGSSRADGVSVRTYSC
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggatggccggcggggctcggcgctgggc
ccggacgaggcgggcggcgagctggagcgcctcatggtcacgatgctcacagagcgcgag
cgcctgctggagacgctgcgcgaagcgcaggacgggctggcgacggcgcagctacggctg
cgcgaactgggccacgagaaggactcgctgcagcgccagctcagcatcgcgctgccccag
gagtttgcggcactgacaaaagagttgaatttatgtcgggagcagttactggagcgggag
gaagagattgccgagttgaaggcggagcggaataacacgcggcttctcctggaacatctg
gagtgcctggtgtccagacacgagagatcactacgcatgactgtggtgaagcgccaggcg
cagtccccgggcggggtttcctctgaagtggaggtgctcaaggctctaaaatccctcttc
gagcaccacaaggccctggatgagaaggtccgggagcggctgcggatggcgctggagcgg
gtggcagtactggaggaagagctggaactgagcaaccaggagactctgaaccttcgagag
cagctgtcgaggcgacggtcgggattggaggagcctggcaaggagggggacgggcagtcc
cttgccaatggcctgggccccagtggggattccagccggcgtacagcagaactggaggag
acaatggaacggcagcgggcagaggtttgccagctgcgggagcgcctggcggtactgtgt
cgccagatgagccagctggaggaggagctgggtactgcccaccgcgagctggggaaagcc
gaagaagccaactctaagctccagcgagatctcaaggaggcactggcacagcgggaagat
atggaggagcgaatcacaacgttggagaagcgttacctgagcgcccagcgtgaggccaca
tctctgcatgacgccaatgacaagttggagaacgagttggccagtaaagaatcactgtac
cgacagagtgaagagaagagccgtcagctggccgagtggctggatgatgccaaacagaag
ctgcagcaaacattgcagaaggcggagaccttgcctgagatagaggcacagctggcccag
cgtgtggcagccctcaacaaggctgaggaacgtcatgggaatttcgaggaaagactccgg
caactggaggcccagttggaggagaagaaccaggagctgcagcgggcccggcagcgagag
aagatgaacgatgaccacaacaagcggctgtctgagacagtggacaaactgctgagcgag
tccaacgaacggttacagcttcacctcaaggagcgcatgggggcgctggaggagaagaac
tccctgagtgaggagattgccaacatgaagaagcttcaggatgagctgctgctcaacaag
gaacagctcctggctgagatggagcggatgcagatggagatcgaccagctgcgcggcagg
ccgccctcctactccaggtctctcccgggcagtgccctggagctccgttactcccaggca
cccacattaccttctggtgcccacctggacccctatggggctggaagtggcagggcaggc
aagagaggtcgctggtcaggagtcaaagacgaggcatccaaggattgggaacgggccgcg
cctgaagggtccattccgccccccttccctggggagctggacggctcagatgaggaggag
gcagagggcgtgttcggggcagagctgctctcgcccagcgggcaggcggatgtgcagact
ctggccatcatgctccaggagcagctggaggccatcaacaaggagatcaagctaatccag
gaggagaaggaaaccacagagcaaagggcagaggagctggagagtcgggtgtcggggtct
ggcctggactccctgggccgctaccgcagcagctgctcactgcccccctccctcaccacc
tccaccctggctagcccctcccctcctagctcagggcactcaacaccccgtctggcgccc
ccaagccctgcccgggagggcactgacaaaactaatcatgtccccaaggaagatactggg
gctccccgaggggagggaccagccattccaggagacaccccacctcctactccccgctct
gcccgccttgagagaatgacccaggccttggcactgcaggcaggatccttggaagatggg
ggaccatcccggggcagtgagggggctccagattccctgcacaaagccccaaagaagaag
agcattaagtcatccattgggcgtctcttcggcaaaaaggagaagggacggatggtggca
cctggccgggacagcccctctctggcgggaactccctccgatgagactctggccactgac
cccctggggctatccaagctgacaggcccaggagacaaggacagaagaaacaagaggaag
cacgagctcctggaagaagcctgtcgccagggcctgccttttgctgcctgggatggtccc
accgtggtctcctggctggagctgtgggtaggcatgcccgcgtggtacgtggctgcctgc
cgcgccaacgtcaagagtggggccatcatggccaacctgtccgatacggagatccagcgc
gagatcggaatcagcaaccccctgcaccggctcaagctacgcctcgccatccaggagatg
gtttcgctcacctctccttcggctccagcctcgtcccgcacgtccacaggaaacgtgtgg
atgacccacgaggagatggaatccctcaccgccacgaccaagcccgagaccaaggagatc
agctgggagcagatcctggcatacggcgacatgaaccacgagtgggtgggaaatgactgg
ctgcccagcctggggctgccccagtaccgcagctacttcatggaatcgctggtggatgcg
cgcatgttagaccatctgaacaagaaggagctccggggccaactcaagatggtggacagc
ttccacagagtgagtttgcattatggaatcatgtgtctgaaacggctcaactatgaccgg
aaagacttagagcggcggcgggaagaaagccagacccagatcagagatgtgatggtgtgg
tccaatgagcgggtcatgggttgggtatccggcctcggtctgaaggaattcgccacgaac
ctcacggagagcggggtgcacggggcgctgctggccctggacgagaccttcgactactcg
gacctggctttgctcctgcagatccccacgcagaacgcccaggcccggcaactcctggag
aaagaattcagcaacctcatctccttgggcacagaccggcggctggacgaggacagcgcc
aagtcctttagccgctccccatcctggaggaagatgttccgagagaaggacctccgaggc
gtcactcccgactcagctgagatgttgccccccaactttcgttcggccgcagcaggagcc
ctgggctcgcctgggcttcctctccgcaagttgcaaccggaaggccagagttcggggagt
tcccgggcagacggcgtgtcggtgcggacatattcctgctag
DBGET
integrated database retrieval system
