Sorex fumeus (smoky shrew): 130043635
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Entry
130043635 CDS
T10594
Symbol
IRX3
Name
(RefSeq) iroquois-class homeodomain protein IRX-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130043635 (IRX3)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130043635 (IRX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BUD22
MRP-S32
Motif
Other DBs
NCBI-GeneID:
130043635
NCBI-ProteinID:
XP_055992043
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MSFPQLGYQYIRPLYPPERPGAAGGGGGGAGSRGGPGAGASELAASGSLSNVLSSVYGAP
YAAAAAAAAAAQGYGAFLPYAAELPIFPQLGAQYELKDSPGVQHPAAAAAFPHPHPAFYP
YGQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFA
NARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDGKRELELEEEELGGEEED
TGGEGLADDEEDEEIDLENLDGAAAGPELALAGATHRDGELGLGPISDSKNNSDSDDSSE
GLEERPLPILSLAPAPPAVATAPPSPPSPPAGLDPCAPAPAPASAALQKPKIWSLAETAT
SPDNPRRSPPGAGGSPTGAAVAPTSLQLSPAAAAAAAAAAHRLVSAPLGKFPAWTNRPFP
GPPPGPRPHPLSLLGSAPPHLLGLPGAAGHPAAAAAAAAAAAAATFARPAEPEGGTDRCS
ALEVEKKLLKTAFQPVPRRPQNHLDAALVLSALSSS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccctcagctcggataccagtacattcggccgctctacccgcccgagcgccca
ggggccgccgggggcggcggcggcggcgcggggtcccgcggaggcccgggggccggcgcc
tcggagctggccgcctcgggctccctgtccaacgtgctctcgtcggtgtacggggcgccc
tatgccgcggccgccgccgccgccgccgccgcccagggctacggcgcctttctgccctac
gccgcggaactccccatcttcccgcagctgggcgcgcagtatgagctgaaggacagcccc
ggggtgcagcatcccgccgcggccgccgcgtttccgcacccgcaccccgccttctacccc
tacggccagtaccaattcggggacccgtcccgtcccaagaacgccacgcgcgagagcacc
agcacgctcaaggcctggctgaacgagcaccgcaagaacccctaccccaccaagggcgag
aagatcatgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgcc
aacgcgcgccggcgcctcaagaaggagaacaagatgacgtgggcgccccgcagccgcacg
gacgaggagggcaacgcttatgggagcgaacgcgaggaagaggacgaggaagaggacgaa
gaagatggtaaacgcgaactggagctggaagaggaggaactcggcggggaggaggaggac
accggaggcgagggcttggcggacgacgaggaggacgaggagatcgatttggagaactta
gacggcgcggccgcggggcccgagctggccctggccggggcgacgcacagggacggcgag
ctgggcctggggcccatttcagactccaagaacaacagcgactcggacgatagctccgag
ggcctggaggagcgtccgctgcccatcctgagtctggccccggcgccccccgcggtggcg
acggctccaccgtctcctccctcgcccccagcgggcctggacccttgcgcgcccgctcca
gcgcccgcctccgccgccctgcagaaacccaagatctggtcgctggccgagacggccacc
agcccggacaacccgcgccgctcgcctccgggtgcggggggctcgcccactggcgccgcc
gtcgcgcccaccagcctgcagctctcgcccgccgccgcagccgccgccgccgccgccgcg
cacagactggtctcggcgccgctgggcaagttcccggcttggaccaaccggccgttcccg
ggcccgccgcccggcccccgcccgcacccgctctccctgctcggctcggccccgccacac
ctgctgggacttcccggagccgcgggccaccccgccgccgccgccgctgccgccgccgcc
gccgccgcggccaccttcgccaggcctgcggagcccgagggcggaacagatcgctgtagt
gccttggaagtggagaaaaagttactcaagacagctttccaacccgtgccgcgtcggccc
cagaaccacctggatgccgctttggtcttgtcggctctctcctcgtcctag
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