Sorex fumeus (smoky shrew): 130043669
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Entry
130043669 CDS
T10594
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
130043669 (TDRD12)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130043669 (TDRD12)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130043669
NCBI-ProteinID:
XP_055992076
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Position
Unknown
AA seq
1234 aa
AA seq
DB search
MLEVLVLKIEDPGCFWVIIKGYSPFLDHEVDYQKLHSAMNDFYNSMCQDVEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSIVSSADHYLAECFLVDFAKNIPVKSKNIRVAVESFMQLPY
RAKKFRLYCTQPVTLHIDFCEDSAEILPSKKWDSAAVQYFQSILKETSQVEAKLCAVEED
TFEVYLYVTIKNEKVCVNDDLVAKNFACYVSPMENKSLNGLEKPRMNLKSAAFSSKLNPA
LTLWPMFVQGKDGQGMKNSQDLAFLIQSLRPPWPKSVELGPASSSLALSKTKSEKEEQCL
SLKDVNKCVESSVYWPTKRGITIYAEPDIPAPSTLCQKPNEKSFRLAEKKEYDEKNGCVK
LLQFLNPDPLRADGISDLKQLQKLKSGTWQPFAVLRNKVEPCLSMDVAPLSTDLKKALQR
NKFPGPSHTASYAWPPIARGCDVVVISHCGNDPLLYLLPLLTILQTGGCYKSLPSRNGPL
AVIVCPGWKKAQFIFELLGDYNLSSKPLHPMLLTIGLHKDEAKNMKLPRGCDVIVTTPHS
LLRLLKYQSLLFLRLCHLILDEAEVLFVEANEQMFAILDNFKKNTEVEERESAPHQIVAV
GVHWNKHIEHLIKEFMNDPHIVITALEEAALYGSVQQIVHLCLESEKTSTLLQTLDFVPS
QAQKTLIFTCSEAETEIVSKVVESSSIFCLKMHKDLIFNMKSVLEQWKKKLSSGSHIVLA
LTDDCIPLLAITDATCVIHFSFPSSPKIFGARLYCMSDHFQGTTEQGSPAEQGDRKTKSV
LLLTERNACHAVGILRYLERADAKIPSQLYEFTAGVLEAKEDKKARRPLCPYLKAFGFCK
DKRICPDRHHINPEIDMSRKFSNQDLPKFGYIKIIPFYILNATKYFGRIIDKHVDLYETL
NAEMKAYFEDFNNKTTVEKVEKFGLYGLAEKAVFHRVQVLEKSAKEDTYVLDSVLVNFID
EGRTGLVTRDQLLHLPDRFHTLPPQAMEFIVCRVKPADSEIEWNPKVTRYIHHKIIGKPH
DAKVILALGNTVWIDPMVHITKLSNLKTSIIDYNVRAEILSMGMGVDNSEHIEQLEKLFK
EVLPCEEHPIPTTFYPHVRWFQKDDVVILRIRLRNVKDYKCKYFQDRVVFSAWVEDRFYL
ADMVLEANIIKDDCKCLIKNDEPVITLVKEKRESWCSLLKQKNPNVAFDFDHWEECEEDS
HFSKGVHSKPLPCKVAEVMENGDKMSEEKGSESD
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtgctggtgctgaagattgaagatccaggttgtttctgggttattataaaa
ggatacagtccctttctagatcatgaagttgactatcaaaaactacatagtgccatgaat
gacttctataatagcatgtgtcaagatgtagaaatcaagccactaatgttggaagaaggg
caggtttgtgtggtttattgtcaagaactgaagtgctggtgcagggctgttattaagtca
attgtgtcatcggcagatcattacctggcagaatgttttttggtggattttgccaagaat
attccagtgaaatctaaaaacatacgtgttgcagtggaaagttttatgcagcttccgtac
agagcgaagaaattcaggttatattgcacacagcctgttaccttacacattgacttctgt
gaagacagtgctgaaattttaccctccaagaagtgggacagtgccgctgttcagtatttt
cagagcattctcaaagagacttcccaggtggaagccaaattatgtgctgtggaagaagat
acttttgaggtttatctttatgtaacgataaaaaatgaaaaggtttgtgttaatgatgat
ctggttgcaaagaactttgcttgttacgtatcacccatggaaaacaaaagccttaatggc
ttagagaagccaagaatgaatctaaagtcagcagccttttccagtaaactcaacccagca
ctcactctctggccaatgtttgtgcaaggaaaagatggccaaggaatgaaaaattcccag
gatttggcttttctgatacagtctctgcggcctccctggcccaagagtgtcgagctagga
ccagcctcttcatccctggcactgtcgaagacaaaatctgaaaaggaagaacagtgcctc
tccctgaaagatgtaaacaagtgtgttgaatcttcagtgtactggcccacaaagagaggc
ataactatatatgctgagcccgatataccagcccccagtactttgtgtcagaagccaaac
gagaaatccttcagattggccgagaagaaagaatatgatgagaagaatggctgtgtgaaa
ttattgcagtttttaaatccagatccgctgagagctgatggaatctctgatttgaagcag
ttacagaaactgaagtcaggcacctggcagccctttgcagtactccgtaacaaagtggaa
ccgtgcttgtctatggatgtggcaccactttccacggacctgaaaaaggctcttcaaagg
aacaagtttccaggaccgagccacactgcgtcttacgcgtggcctcccatcgcgcggggc
tgtgatgtggtggtcatctcccactgtggaaacgacccattgttgtacctcctgccactg
ctcacaattttgcaaacagggggctgctacaagtcactaccgagtagaaacggacctctg
gccgtcatcgtgtgccctggctggaagaaggcccagttcatttttgagttgctgggggac
tataacctgtcgtccaagcctcttcaccccatgctactgacaattggactccacaaagat
gaagccaagaacatgaagcttccaagagggtgtgatgtgattgtcacgacaccacatagc
ctcctgagattgctcaaataccaaagcttgttgtttcttagactctgtcacctcattttg
gatgaggcagaagtactgttcgttgaagctaatgaacaaatgtttgctatattagataac
tttaaaaaaaatactgaggttgaagaaagggagtctgcaccacatcagattgtcgccgtt
ggcgtccactggaacaaacacatagaacatttaatcaaggaattcatgaatgacccgcac
atcgtgatcaccgccctggaggaggccgcgctttatggcagtgtccaacagatagtgcac
ctttgcctcgaaagtgaaaaaacctccactttgctccagactcttgattttgttcccagt
caagcacaaaagaccttgattttcacttgttcagaagctgagacggagatcgtgtctaag
gttgtagaaagcagttcaatattttgcctgaaaatgcacaaagacttgatctttaacatg
aagagtgttttagagcagtggaagaagaagttaagttctggctctcacattgtgttagcc
ttaacagatgactgcatcccactcttggccatcactgatgcgacctgtgtgatccacttc
agcttcccttcttcacccaagatttttggtgcacgcctctattgcatgtctgatcatttc
cagggtacaaccgaacagggatctcccgcagagcagggagacaggaagaccaagtctgtc
ttgctgctgacagagagaaacgcatgccatgcagtcggtattcttcgctacttggaacga
gcagacgccaagatcccgtcccagctgtatgagttcacagcaggagtcctggaagccaaa
gaagataagaaagcgagaaggcctctctgtccataccttaaggcttttgggttttgcaaa
gacaaaaggatatgtcctgaccgacatcatattaatccagaaatagacatgtcaaggaaa
ttttcaaaccaggatctacccaagtttggttacattaaaattatacccttttatattttg
aacgcaacaaaatactttggtcgtataattgataaacatgtggatctttatgaaactctg
aatgctgaaatgaaggcatattttgaagattttaataataaaacaactgttgaaaaggtg
gagaaatttggattatatggattggcagaaaaagcagtttttcatagggtccaggtgttg
gagaagagtgcaaaggaagacacctacgtcttggacagtgtcctggtcaatttcatagat
gagggcaggacggggcttgtcacccgagaccagctgctgcatctcccagaccgtttccac
acgctgcccccacaagccatggagtttatcgtgtgtcgagtcaagcccgccgatagcgaa
attgagtggaatccaaaggttactaggtatattcatcacaaaattattggaaaaccacat
gatgcaaaagtgatactggctttggggaatacggtttggatcgatccaatggtgcacatc
accaaactttcaaatttgaaaacttctatcattgattataacgttcgagctgaaattctg
tcaatgggcatgggtgttgacaattcagaacatatcgaacaactggagaaattattcaaa
gaagtgctgccctgtgaagaacacccgatcccgacaaccttctacccccacgtcaggtgg
ttccagaaggatgacgtggtcatactgagaataaggctgaggaatgtgaaagattacaag
tgtaaatactttcaagatagagttgttttcagcgcctgggtagaagacagattttacttg
gctgacatggtcctggaggccaacatcataaaggacgactgcaaatgcctgatcaagaat
gacgagcctgtcatcactcttgtaaaagagaagagggaatcttggtgcagcttgctcaaa
cagaagaatcctaatgtggcctttgactttgatcactgggaagaatgcgaggaggacagc
cacttctccaagggtgtccactcgaaacccctgccctgcaaagtggctgaggtcatggag
aatggtgacaaaatgtcagaagagaagggcagcgagagtgactga
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